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アセンブル , シーケンス , Assemble , Sequence , Brassica juncea var. T84-66 (tumida) , Leaf mustard (T84-66, tumida) , セイヨウカラシナ(T84-66変種, tumida変種)

Brassica juncea

Genome Assembly ID:t3707.G001

Sequence Name:v1.5

Details of the Assembled Genome Sequences

Assembly Name v1.5 Biological Sample var. T84-66, var. tumida
Number of Sequences 1,966 Number of Chromosomes 2n = 4x = 36
Total Length (bp) 937,030,072 N50 Length (bp) 42,666,085
Number of Genes 79,644 Number of Genes Source File Bju.chr.modified_id.pep.fa
Number of Genes Annotated by Hayai-annotation 79,644 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio, Bionano Read Depth 410.0x
Assembly Method AllPaths v. 44540 Estimated Genome Size (Mb) 922
Sequencing Method Comments NA Comments var. T84-66 (var. tumida)
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Mingfang Zhang (Ministry of Agriculture), Sally A Mackenzie (University of Nebraska) Data Source BRAD: Brassica Database
DOI/PMID 10.1038/ng.3657 Data Source URL http://brassicadb.cn
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.6%[S:9.1%,D:90.5%],F:0.1%,M:0.3%,n:1614 BUSCO Gene (pep/cds) C:95.3%[S:20.1%,D:75.2%],F:2.4%,M:2.3%,n:1614

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