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TOP > Species list > Brassica juncea > genome data
Brassica juncea

Assembled Sequences

Brassica juncea var. T84-66 (tumida) , Leaf mustard (T84-66, tumida) , セイヨウカラシナ(T84-66変種, tumida変種) , GenBank , EMBL , DDBJ

Assembly Name Biological Sample Assembly Level Annotation
(gff / gff3)
Gene
(cds / gene)
Hayai
Annotation
ZEN
Transcripts
(cDNA / mRNA)
Amino Acid
(pep / aa)
Download JBrowse Comments

v1.5

var. T84-66, var. tumida

Chromosome

var. T84-66 (var. tumida)

SRA Sequences

Sequence Type

Biological Sample Sequence Name Accession JBrowse Comments

v1.5

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1044457

var. tumida; ecotype:vegetable, zhacai; sample name:PE170_110711_I249

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048137

var. tumida; ecotype:vegetable, zhacai; sample name:PE250_324D112I

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048138

var. tumida; ecotype:vegetable, zhacai; sample name:PE500_I249L1

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048142

var. tumida; ecotype:vegetable, zhacai; sample name:MP3K_1

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048152

var. tumida; ecotype:vegetable, zhacai; sample name:MP3K_2

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048153

var. tumida; ecotype:vegetable, zhacai; sample name:MP5K_324D7III

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1048154

var. tumida; ecotype:vegetable, zhacai; sample name:MP8K_1

Whole Genome Sequence (Short Read)

T84-66 (inbred line)

SRA270346

SRX1052134

var. tumida; ecotype:vegetable, zhacai; sample name:MP10K2-D10III

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054716

ecotype:vegetable; sample name:R1

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054719

ecotype:oilseed; sample name:R10

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054720

ecotype:oilseed; sample name:R11

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054722

ecotype:oilseed; sample name:R12

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054724

ecotype:oilseed; sample name:R11

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054726

ecotype:oilseed; sample name:R14

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054727

ecotype:oilseed; sample name:R15

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054728

ecotype:vegetable; sample name:R16

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054729

ecotype:vegetable; sample name:R17

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054730

ecotype:vegetable; sample name:R2

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054731

ecotype:vegetable; sample name:R3

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054732

ecotype:vegetable; sample name:R4

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054734

ecotype:vegetable; sample name:R5

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054735

ecotype:vegetable; sample name:R6

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054738

ecotype:vegetable; sample name:R7

Whole Genome Sequence (Short Read)

vegetable

SRA271985

SRX1054739

ecotype:vegetable; sample name:R8

Whole Genome Sequence (Short Read)

oilseed

SRA271985

SRX1054742

ecotype:oilseed; sample name:R9

Whole Genome Sequence (Short Read)

F1-male-parent

SRA272500

SRX1056097

sample name:F1-male-parent

Whole Genome Sequence (Short Read)

F1-female-parent

SRA272500

SRX1056099

sample name:F1-female-parent

Whole Genome Sequence (Short Read)

NPJ712

SRA430662

SRX1818640

Whole Genome Sequence (Short Read)

Purple Leaf Mustard

SRA800110

SRX4948029

ecotype:vegetable