Theobroma cacao| ID | Population Name | Line List | Variant Type |
Reference Sequence | Sequence Type | Variant Counts | Data Source | Comments | Download | TASUKE+ | JBrowse | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Table | Vcf file |
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|
t3641.SNP000001 |
Theobroma_cacao_SRA_100_lines_20201005 |
|
SNPs, In/dels |
WGS |
10,148,204 | Plant GARDEN |
Bwa/bcftools 1.9, (QUAL≥200, 10≤DP≤200, max-missing=0.7) |
|
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