Sequence Name:Theobroma_cacao_criollo_chr.v2.0
Assembly Name | Theobroma_cacao_criollo_chr.v2.0 | Biological Sample | Belizean Criollo, genotype B97-61/B2 |
Number of Sequences | 11 | Number of Chromosomes | 2n = 2x = 20 |
Total Length (bp) | 324,761,211 | N50 Length (bp) | 36,364,294 |
Number of Genes | 30,655 | Number of Genes Source File | Theobroma_cacaoV2_annot_protein.faa |
Number of Genes Annotated by Hayai-annotation | 30,655 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBIo | Read Depth | 21x |
Assembly Method | Newbler | Estimated Genome Size (Mb) | 430 |
Sequencing Method Comments | NA | Comments | Belizean Criollo is a group of relic landraces. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | X. Argout (Centre de cooperation internationale en recherche agronomique pour le developpement (CIRAD)) | Data Source | Cacao Genome Hub |
DOI/PMID | 10.1186/s12864-017-4120-9 | Data Source URL | https://cocoa-genome-hub.southgreen.fr/node/4 |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.4%[S:97.8%,D:0.6%],F:1.0%,M:0.6%,n:1614 | BUSCO Gene (pep/cds) | C:99.7%[S:66.9%,D:32.8%],F:0.1%,M:0.2%,n:1614 |