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アセンブル , シーケンス , Assemble , Sequence , Fagopyrum esculentum , Buckwheat , ソバ

Fagopyrum esculentum

Genome Assembly ID:t3617.G003

Sequence Name:Fagopyrum_esculentum_hap1

Details of the Assembled Genome Sequences

Assembly Name Fagopyrum_esculentum_hap1 Biological Sample cv. Xinong9976
Number of Sequences 676 Number of Chromosomes 2n = 2x = 16
Total Length (bp) 1,263,710,397 N50 Length (bp) 156,067,145
Number of Genes 52,725 Number of Genes Source File Fagopyrum_esculentum_hap1.prot.long.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel II, Hi-C Read Depth 26.85x (PacBio), 71.89x (Hi-C)
Assembly Method hifiasm, Juicer v1.6.2, 3D-DNA v180922 Estimated Genome Size (Mb) 1,270
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jianquan Liu (Sichuan University) Data Source Figshare
DOI/PMID 10.1186/s12915-023-01587-1 Data Source URL https://figshare.com
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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