Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Diospyros kaki , Persimmon , カキ

Diospyros kaki

Genome Assembly ID:t35925.G002

Sequence Name:ASM2877740v1

Details of the Assembled Genome Sequences

Assembly Name ASM2877740v1 Biological Sample Xiaoguotianshi
Number of Sequences 11,978 Number of Chromosomes 2n = 6x = 90
Total Length (bp) 4,500,528,094 N50 Length (bp) 44,013,165
Number of Genes 153,288 Number of Genes Source File Dka.pep.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel II, Hi-C Read Depth 39.53x (PacBIo), 98.39x (Hi-C)
Assembly Method Hifisam v0.13-r308, BWA, ALLHIC v0.9.8 Estimated Genome Size (Mb) 4533.56_
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jianmin Fu (Chinese Academy of Forestry) Data Source NCBI; Figshare
DOI/PMID 10.1038/s41597-023-02175-2 Data Source URL https://www.ncbi.nlm.nih.gov/
https://figshare.com
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.0%[S:1.2%,D:97.8%],F:0.6%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:97.3%[S:2.4%,D:94.9%],F:2.0%,M:0.6%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format