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アセンブル , シーケンス , Assemble , Sequence , Humulus lupulus var. cordifolius , Hop (var. cordifolius) , ホップ (cordifolius変種), セイヨウカラハナソウ

Humulus lupulus

Genome Assembly ID:t3486.G002

Sequence Name:hl_KR_version_1.0.fasta

Details of the Assembled Genome Sequences

Assembly Name hl_KR_version_1.0.fasta Biological Sample var. cordifolius, cv. Karahanasou
Number of Sequences 132,476 Number of Chromosomes 2n = 20
Total Length (bp) 2,049,208,583 N50 Length (bp) 37,081
Number of Genes 0 Number of Genes Source File NA
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 18.8x
Assembly Method CLC Assembly Cell v3.22, SSPACE v2.3, BWA Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments The gap-closed scaffold of 'Shinshu Wase' was used as the draft reference hop genome (hl_version 1.0). The authers were employed it as the basis for resequencing the 'Karahanasou'.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Eiichiro Ono (Suntory Global Innovation Center (SIC) Ltd.) Data Source NCBI
DOI/PMID 10.1093/pcp/pcu169 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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