Plant GARDEN How To ▶︎



アセンブル , シーケンス , Assemble , Sequence , Lotus japonicus , Japanese trefoil , ミヤコグサ

Lotus japonicus

Genome Assembly ID:t34305.G002

Sequence Name:Lj3.0

Details of the Assembled Genome Sequences

Assembly Name Lj3.0 Biological Sample Miyakojima MG-20
Number of Sequences 9 Number of Chromosomes 2n = 2x = 12
Total Length (bp) 447,416,816 N50 Length (bp) 62,285,374
Number of Genes 48,105 Number of Genes Source File Lj3.0_pep.fna
Number of Genes Annotated by Hayai-annotation 48,105 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger, Illumina, 454 Read Depth 35x
Assembly Method Paracel Genome Assembler Estimated Genome Size (Mb) 465
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Satoshi TABATA (Kazusa DNA Research Institute) Data Source 3.0
DOI/PMID 10.1093/dnares/dsn008 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:93.5%[S:86.9%,D:6.6%],F:3.7%,M:2.8%,n:1614 BUSCO Gene (pep/cds) C:79.8%[S:59.5%,D:20.3%],F:11.9%,M:8.3%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Start Position
End Position
Complementary Strand