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アセンブル , シーケンス , Assemble , Sequence , Lotus japonicus , Japanese trefoil , ミヤコグサ

Lotus japonicus

Genome Assembly ID:t34305.G002

Sequence Name:Lj3.0

Details of the Assembled Genome Sequences

Sequence Name Lj3.0 Biological Sample Miyakojima MG-20
Number of Sequences 9 Number of Chromosomes 2n = 2x = 12
Total Length (bp) 447,416,816 N50 Length (bp) 62,285,374
Number of Genes 48,105 Number of Genes Source File Lj3.0_pep.fna
Number of Genes Annotated by Hayai-annotation 48,105 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger, Illumina, 454 Read Depth 35x
Assembly Method Paracel Genome Assembler Estimated Genome Size (Mb) 465
Sequencing Method Comments Comments
DOI/PMID 10.1093/dnares/dsn008 Corresponding author Satoshi TABATA (Kazusa DNA Research Institute)
Data Source Lotus japonicus Genome Sequencing Project Data Source URL http://www.kazusa.or.jp/lotus/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:93.5%[S:86.9%,D:6.6%],F:3.7%,M:2.8%,n:1614 BUSCO Gene (pep/cds) C:79.8%[S:59.5%,D:20.3%],F:11.9%,M:8.3%,n:1614

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