Plant GARDEN How To ▶︎



アセンブル , シーケンス , Assemble , Sequence , Lotus japonicus , Japanese trefoil , ミヤコグサ

Lotus japonicus

Genome Assembly ID:t34305.G001

Sequence Name:Lj2.5

Details of the Assembled Genome Sequences

Sequence Name Lj2.5 Biological Sample Miyakojima MG-20
Number of Sequences 7 Number of Chromosomes 2n = 2x = 12
Total Length (bp) 301,341,829 N50 Length (bp) 44,510,304
Number of Genes 38,482 Number of Genes Source File Lj2.5_cds.ffn
Number of Genes Annotated by Hayai-annotation 37,980 Hayai-Annotation Version zen_v2.0
Sequencing Method clone-by-clone, shotgun Read Depth NA
Assembly Method PGA v. 2.6.2 Estimated Genome Size (Mb) 472
Sequencing Method Comments Comments
DOI/PMID 10.1093/dnares/dsn008 Corresponding author Satoshi TABATA (Kazusa DNA Research Institute)
Data Source Lotus japonicus Genome Sequencing Project Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:54.6%[S:52.7%,D:1.9%],F:5.5%,M:39.9%,n:1614 BUSCO Gene (pep/cds) C:50.5%[S:48.3%,D:2.2%],F:18.2%,M:31.3%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Start Position
End Position
Complementary Strand