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アセンブル , シーケンス , Assemble , Sequence , Echinochloa oryzicola , Late watergrass , タイヌビエ (oryzicola種)

Echinochloa oryzicola

Genome Assembly ID:t338574.G002

Sequence Name:GWHBDNS00000000

Details of the Assembled Genome Sequences

Assembly Name GWHBDNS00000000 Biological Sample ZJU2
Number of Sequences 370 Number of Chromosomes 2n = 4x = 36
Total Length (bp) 945,562,925 N50 Length (bp) 54,427,921
Number of Genes 68,541 Number of Genes Source File GWHBDNS00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Hi-C Read Depth 117x (Hi-C)
Assembly Method DipHiC Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments The contig-level draft assemblies have been assembled previously (10.1016/j.molp.2020.07.001). The authers further used Hi-C data to anchor the contigs into chromosomes by using DipHiC.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Chu-Yu Ye (Zhejiang University) Data Source Genome Warehouse
DOI/PMID 10.1038/s41467-022-28359-9 Data Source URL https://bigd.big.ac.cn/gwh/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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