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アセンブル , シーケンス , Assemble , Sequence , Picea abies , Norway spruce , ドイツトウヒ

Picea abies

Genome Assembly ID:t3329.G001

Sequence Name:Pabies01-genome

Details of the Assembled Genome Sequences

Assembly Name Pabies01-genome Biological Sample clone Z4006
Number of Sequences 10,253,694 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 12,301,351,591 N50 Length (bp) 5,206
Number of Genes 66,632 Number of Genes Source File Pabies1.0-all-pep.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 38x (haploid PE reads), 55x (diploid PE reads), 55x (diploid long PE reads)
Assembly Method CLC Assembly Cell Beta-4.0.6, BESST2, GAM-NGS Estimated Genome Size (Mb) 19,600
Sequencing Method Comments The assembly strategy combining fosmid pools with both haploid and diploid whole genome shotgun (WGS) data, and RNA sequencing (RNA-Seq) data. Comments synonym: Picea excelsa, Picea montana, Pinus abies
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Stefan Jansson (Umea University) Data Source ConGenIE: Conifer Genome Integrative Explorer
DOI/PMID 10.1038/nature12211 Data Source URL
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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