Sequence Name:Pabies01-genome
Assembly Name | Pabies01-genome | Biological Sample | clone Z4006 |
Number of Sequences | 10,253,694 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 12,301,351,591 | N50 Length (bp) | 5,206 |
Number of Genes | 66,632 | Number of Genes Source File | Pabies1.0-all-pep.faa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 38x (haploid PE reads), 55x (diploid PE reads), 55x (diploid long PE reads) |
Assembly Method | CLC Assembly Cell Beta-4.0.6, BESST2, GAM-NGS | Estimated Genome Size (Mb) | 19,600 |
Sequencing Method Comments | The assembly strategy combining fosmid pools with both haploid and diploid whole genome shotgun (WGS) data, and RNA sequencing (RNA-Seq) data. | Comments | synonym: Picea excelsa, Picea montana, Pinus abies |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Stefan Jansson (Umea University) | Data Source | ConGenIE: Conifer Genome Integrative Explorer |
DOI/PMID | 10.1038/nature12211 | Data Source URL | http://congenie.org |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |