Sequence Name:Mindica_2.1
Assembly Name | Mindica_2.1 | Biological Sample | Alphonso |
Number of Sequences | 250 | Number of Chromosomes | 2n = 2x = 40 |
Total Length (bp) | 391,961,648 | N50 Length (bp) | 17,652,500 |
Number of Genes | 52,078 | Number of Genes Source File | GCF_011075055.1_CATAS_Mindica_2.1_protein.faa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Sequel II Platform | Read Depth | 240.0x |
Assembly Method | Canu v.1.8 | Estimated Genome Size (Mb) | 360 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Peng Wang(Chinese Academy of Tropical Agricultural Sciences ), Songnian Hu(Chinese Academy of Sciences), Yeyuan Chen(Hainan University) | Data Source | NCBI |
DOI/PMID | 10.1186/s13059-020-01959-8 | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.9%[S:82.7%,D:16.2%],F:0.6%,M:0.5%,n:1614 | BUSCO Gene (pep/cds) | C:99.7%[S:50.3%,D:49.4%],F:0.2%,M:0.1%,n:1614 |