Vitis viniferaAssembly Name:Vitis_vinifera.12X
Gene File:Vitis_vinifera.12X.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | VIT_14s0006g02190.t01 |
| PEP | VIT_14s0006g02190.t01 |
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| Position on the Genome | Chromosome | 14 | |
| Start Position | 19450017 | ||
| End Position | 19457176 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00179511 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA ligase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
|
| Protein name | PREDICTED: DNA ligase 6 isoform X2 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF04675,PF01068,PF07522,PF04679 |
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| Pfam Description | Details | ||
| InterPro ID | IPR012310,IPR012309,IPR012308,IPR011084 |
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| InterPro Description | Details | ||
| GO ID | GO:0003910,GO:0005524,GO:0006281,GO:0006310,GO:0003677 |
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| GO Description | Details | ||
| GOslim ID | GO:0006266,GO:0003676,GO:0006259,GO:0016874,GO:0000166,GO:0043167,GO:0006281 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Vitis vinifera | |
| Family | Vitaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
