Vitis viniferaAssembly Name:Vitis_vinifera.12X
Gene File:Vitis_vinifera.12X.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | VIT_12s0028g03770.t01 |
| PEP | VIT_12s0028g03770.t01 |
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| Position on the Genome | Chromosome | 12 | |
| Start Position | 4643400 | ||
| End Position | 4651215 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00287711 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA-directed RNA polymerase subunit beta |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF04560,PF00562,PF04566,PF04567,PF04565,PF04561,PF04563 |
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| Pfam Description | Details | ||
| InterPro ID | IPR007120,IPR007642,IPR015712,IPR014724,IPR007647,IPR007121,IPR037033,IPR037034,IPR007645,IPR007644,IPR007646,IPR007641 |
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| InterPro Description | Details | ||
| GO ID | GO:0032549,GO:0003899,GO:0006351,GO:0003677,GO:0046872 |
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| GO Description | Details | ||
| GOslim ID | GO:0016740,GO:0043167,GO:0016070,GO:0001882,GO:0006351,GO:0009059,GO:0003676 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Vitis vinifera | |
| Family | Vitaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
