Plant GARDEN How To ▶︎

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SNP , Variant , バリアント , 多型 , Gossypium arboreum , Asian cotton , ワタ (arboreum種), キダチワタ

Gossypium arboreum
ID Population Name Line List Variant
Type
Reference Sequence Sequence Type Variant Counts Data Source Comments Download TASUKE+ JBrowse
Table Vcf
file

t29729.SNP000001

Gossypium_arboreum_SRA_100_lines_20200706

SNPs, In/dels

BGI-A2

WGS

1,223,546

Plant GARDEN

Bwa/bcftools 1.9, (QUAL≥200, 10≤DP≤200, max-missing=0.7)