Sequence Name:BGI-A2
Assembly Name | BGI-A2 | Biological Sample | cv. Shixiya1, SXY1 |
Number of Sequences | 75,594 | Number of Chromosomes | 2n = 4x = 52 |
Total Length (bp) | 1,694,649,772 | N50 Length (bp) | 121,338,753 |
Number of Genes | 40,134 | Number of Genes Source File | G.arboreum_BGI-A2_v1.0_protein.fasta |
Number of Genes Annotated by Hayai-annotation | 40,134 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 110x |
Assembly Method | SOAPdenovo v. 2.01 | Estimated Genome Size (Mb) | 1,746 |
Sequencing Method Comments | NA | Comments | The descendant derived from 18 successive generations of self-fertilization of the cultivated diploid cotton Shixiya1. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | John Z. Yu (USDA-ARS), Yuxian Zhu (Wuhan University) | Data Source | COTTON GEN |
DOI/PMID | 10.1038/ng.2987 | Data Source URL | https://www.cottongen.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.9%[S:92.3%,D:6.6%],F:0.7%,M:0.4%,n:1614 | BUSCO Gene (pep/cds) | C:94.7%[S:87.9%,D:6.8%],F:2.2%,M:3.1%,n:1614 |