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アセンブル , シーケンス , Assemble , Sequence , Gossypium arboreum , Asian cotton , ワタ (arboreum種), キダチワタ

Gossypium arboreum

Genome Assembly ID:t29729.G001

Sequence Name:BGI-A2

Details of the Assembled Genome Sequences

Assembly Name BGI-A2 Biological Sample cv. Shixiya1, SXY1
Number of Sequences 75,594 Number of Chromosomes 2n = 4x = 52
Total Length (bp) 1,694,649,772 N50 Length (bp) 121,338,753
Number of Genes 40,134 Number of Genes Source File G.arboreum_BGI-A2_v1.0_protein.fasta
Number of Genes Annotated by Hayai-annotation 40,134 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 110x
Assembly Method SOAPdenovo v. 2.01 Estimated Genome Size (Mb) 1,746
Sequencing Method Comments NA Comments The descendant derived from 18 successive generations of self-fertilization of the cultivated diploid cotton Shixiya1.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author John Z. Yu (USDA-ARS), Yuxian Zhu (Wuhan University) Data Source COTTON GEN
DOI/PMID 10.1038/ng.2987 Data Source URL https://www.cottongen.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.9%[S:92.3%,D:6.6%],F:0.7%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:94.7%[S:87.9%,D:6.8%],F:2.2%,M:3.1%,n:1614

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