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アセンブル , シーケンス , Assemble , Sequence , Dioscorea cayenensis subsp. rotundata , Guinea yam (ssp. rotundata) , ギニアヤム (rotundata変種)

Dioscorea cayenensis

Genome Assembly ID:t29710.G002

Sequence Name:TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25

Details of the Assembled Genome Sequences

Assembly Name TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25 Biological Sample subsp. rotundata, cv. TDr96_F1
Number of Sequences 2,254 Number of Chromosomes 2n = 2x = 40
Total Length (bp) 584,308,608 N50 Length (bp) 23,441,323
Number of Genes 33,298 Number of Genes Source File GCF_009730915.1_TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22_25.fasta_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Nanopore PromethION Read Depth 34x
Assembly Method flye v. 2.4.2; pilon v. 1.23; Purge Haplotigs v. 1.0.4; MSTmap Estimated Genome Size (Mb) 584
Sequencing Method Comments NA Comments Synonym: Dioscorea rotundata
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Cedric Mariac(Institut de Recherche pour le Developpement, UMR DIADE), Yves Vigouroux(Institut de Recherche pour le Developpement, UMR DIADE), Thomas L. P. Couvreur(Institut de Recherche pour le Developpement, UMR DIADE, Universite de Yaounde I, Ecole Normale Superieure, Departement des Sciences Biologiques, Laboratoire de Botanique, Systematique et d'Ecologie) Data Source NCBI
DOI/PMID 10.1111/1755-0998.12258 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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