Sequence Name:TDr96_F1_Pseudo_Chromosome_v1.0
Assembly Name | TDr96_F1_Pseudo_Chromosome_v1.0 | Biological Sample | subsp. rotundata, cv. TDr96_F1 |
Number of Sequences | 21 | Number of Chromosomes | 2n = 2x = 40 |
Total Length (bp) | 456,674,974 | N50 Length (bp) | 25,272,979 |
Number of Genes | 19,023 | Number of Genes Source File | Dioscorea_rotundata.TDr96_F1_Pseudo_Chromosome_v1.0.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 19,023 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 100x |
Assembly Method | Allpaths-LG v. r49856, SSPACE Premium v. 2.3 | Estimated Genome Size (Mb) | 580 |
Sequencing Method Comments | NA | Comments | Synonym: Dioscorea rotundata |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Hiroko Takagi (Japan International Research Center for Agricultural Sciences), Robert Asiedu (International Institute of Tropical Agriculture), Ryohei Terauchi (Iwate Biotechnology Research Center) | Data Source | Ensembl |
DOI/PMID | 10.1186/s12915-017-0419-x | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |