Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Sequoia sempervirens , Coast redwood , セコイア (sempervirens種)

Sequoia sempervirens

Genome Assembly ID:t28980.G001

Sequence Name:GCA_007258455.2_SESE.2.2_genomic

Details of the Assembled Genome Sequences

Assembly Name GCA_007258455.2_SESE.2.2_genomic Biological Sample SESE104
Number of Sequences 393,407 Number of Chromosomes 2n = 6x = 66
Total Length (bp) 26,549,681,935 N50 Length (bp) 45,116,641
Number of Genes 118,906 Number of Genes Source File SESE.2_1.peptides.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, Dovetail Chicago, Hi-C, Oxford Nonopore Read Depth 122x(Illumina), 39x(Dovetail Chicago), 39x(Hi-C), 22x(Hi-C)
Assembly Method MaSuRCA version 3.2.8 Estimated Genome Size (Mb) 31,500
Sequencing Method Comments NA Comments Used hybrid mode
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Patrick E McGuire (UC Davis) Data Source NCBI
DOI/PMID 10.1093/g3journal/jkab380 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format