Sequence Name:PHallii_v3.1
Assembly Name | PHallii_v3.1 | Biological Sample | var. filipes genotype FIL2 |
Number of Sequences | 291 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 535,889,049 | N50 Length (bp) | 57,869,027 |
Number of Genes | 37,612 | Number of Genes Source File | GCF_002211085.1_PHallii_v3.1_protein.faa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PACBIO SEQUEL; Illumina HISeq; MOLECULO | Read Depth | 95.87x(PACBIO), 92.1x(Illumina), 6.9x (MOLECULO) |
Assembly Method | MECAT | Estimated Genome Size (Mb) | 500 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | John T.Lovell(University of Texas at Austin), Thomas E.Juenger(University of Texas at Austin), Jeremy Schmutz(Genome Sequencing Center, HudsonAlpha Institute for Biotechnology; Department of Energy Joint Genome Institute) | Data Source | NCBI |
DOI/PMID | 10.1038/s41467-018-07669-x | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.2%[S:96.4%,D:1.8%],F:0.9%,M:0.9%,n:1614 | BUSCO Gene (pep/cds) | C:99.5%[S:66.5%,D:33.0%],F:0.2%,M:0.3%,n:1614 |