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アセンブル , シーケンス , Assemble , Sequence , Panicum hallii var. filipes , Hall's panicgrass (var. filipes) , パニックグラス (filipes変種)

Panicum hallii

Genome Assembly ID:t206008.G001

Sequence Name:PHallii_v3.1

Details of the Assembled Genome Sequences

Assembly Name PHallii_v3.1 Biological Sample var. filipes genotype FIL2
Number of Sequences 291 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 535,889,049 N50 Length (bp) 57,869,027
Number of Genes 37,612 Number of Genes Source File GCF_002211085.1_PHallii_v3.1_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PACBIO SEQUEL; Illumina HISeq; MOLECULO Read Depth 95.87x(PACBIO), 92.1x(Illumina), 6.9x (MOLECULO)
Assembly Method MECAT Estimated Genome Size (Mb) 500
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author John T.Lovell(University of Texas at Austin), Thomas E.Juenger(University of Texas at Austin), Jeremy Schmutz(Genome Sequencing Center, HudsonAlpha Institute for Biotechnology; Department of Energy Joint Genome Institute) Data Source NCBI
DOI/PMID 10.1038/s41467-018-07669-x Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:96.4%,D:1.8%],F:0.9%,M:0.9%,n:1614 BUSCO Gene (pep/cds) C:99.5%[S:66.5%,D:33.0%],F:0.2%,M:0.3%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format