Sequence Name:SspV2
Assembly Name | SspV2 | Biological Sample | cv. Aoyunshenghuo (Olympic flame) |
Number of Sequences | 1,178 | Number of Chromosomes | 2n = 4x = 44 |
Total Length (bp) | 806,486,317 | N50 Length (bp) | 35,138,742 |
Number of Genes | 79,326 | Number of Genes Source File | GCF_004379255.1_SspV2_protein.faa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio; Illumina HiSeq; Hi-C | Read Depth | 82x(PacBio), 40x(Illumina), 105x(Hi-C) |
Assembly Method | 3d-DNA, Juicebox v180922 | Estimated Genome Size (Mb) | 711 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Wei Zhao(Beijing Forestry University), Jian-Feng Mao(Beijing Forestry University) | Data Source | NCBI |
DOI/PMID | 10.1038/s41438-021-00614-y | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.9%[S:17.8%,D:81.1%],F:0.4%,M:0.7%,n:1614 | BUSCO Gene (pep/cds) | C:99.3%[S:13.6%,D:85.7%],F:0.0%,M:0.7%,n:1614 |