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アセンブル , シーケンス , Assemble , Sequence , Selenicereus undatus , Pitaya, Dragon fruit , ドラゴンフルーツ

Selenicereus undatus

Genome Assembly ID:t176265.G002

Sequence Name:PitayaGenomic

Details of the Assembled Genome Sequences

Assembly Name PitayaGenomic Biological Sample Guanhuabai
Number of Sequences 871 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 1,387,322,347 N50 Length (bp) 127,145,692
Number of Genes 277,350 Number of Genes Source File PitayaGenomic.protein.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, Illumina, Hi-C, 10X Genomics Read Depth 113.23x(PacBio), 150.62(10x Genomics), 111.90x(Hi-C)
Assembly Method FALCON version 0.2.2 Estimated Genome Size (Mb) 1,580
Sequencing Method Comments 7 paired-end genome sequencing reads of 250bp to 10kb inserts were processed and loaded onto the Illumina HiSeq x 10 platforms for sequencing. Comments Synonym: Hylocereus undatus
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Yong-hua Qin (South China Agricultural University) Data Source Pitaya genome website
DOI/PMID 10.1038/s41438-021-00612-0 Data Source URL http://www.pitayagenomic.com/download.php
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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