Sequence Name:VPE_r1.0p
Assembly Name | VPE_r1.0p | Biological Sample | Sakai3 |
Number of Sequences | 143 | Number of Chromosomes | 2n = 6x = 52 |
Total Length (bp) | 822,655,281 | N50 Length (bp) | 24,258,466 |
Number of Genes | 62,545 | Number of Genes Source File | VPE_r1.0p.HC.pep.fasta |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Hifi | Read Depth | 36.4x |
Assembly Method | Hifiasm | Estimated Genome Size (Mb) | 899 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Tomoko Hirano (Kyoto Prefectural Univ) | Data Source | Plant GARDEN |
DOI/PMID | Data Source URL | https://plantgarden.jp/ | |
BUSCO Version | 5.0.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.8%[S:18.8%,D:80.0%],F:0.3%,M:0.9%,n:1614 | BUSCO Gene (pep/cds) | C:96.6%[S:25.5%,D:71.1%],F:0.9%,M:2.5%,n:1614 |