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アセンブル , シーケンス , Assemble , Sequence , Saccharum hybrid cultivar , Sugarcane , サトウキビ栽培種

Saccharum hybrid cultivar

Genome Assembly ID:t128810.G006

Sequence Name:SosHApv1

Details of the Assembled Genome Sequences

Assembly Name SosHApv1 Biological Sample Haruno-Ougi
Number of Sequences 869 Number of Chromosomes 2n = 10X = 96
Total Length (bp) 6,440,283,799 N50 Length (bp) 88,834,866
Number of Genes 321,103 Number of Genes Source File SosHApv1.pep.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Hifi, Omni-C Read Depth 27X
Assembly Method Hifiasm, YaHS Estimated Genome Size (Mb) 10,000
Sequencing Method Comments Comments Primary
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Res Inst, University of Tokyo) Data Source Plant GARDEN
DOI/PMID in preparation Data Source URL https://plantgarden.jp/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.6%[S:0.4%,D:99.3%],F:0.1%,M:0.2%,n:1614 BUSCO Gene (pep/cds) C:99.6%[S:1.1%,D:98.5%],F:0.1%,M:0.3%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

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