Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Acorus tatarinowii , Sweetflag , セキショウ

Acorus tatarinowii

Genome Assembly ID:t123564.G001

Sequence Name:GWHBECT00000000.genome

Details of the Assembled Genome Sequences

Assembly Name GWHBECT00000000.genome Biological Sample wild accession
Number of Sequences 358 Number of Chromosomes 2n = 24
Total Length (bp) 415,556,927 N50 Length (bp) 33,598,074
Number of Genes 28,235 Number of Genes Source File ata.pep.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio, Hi-C Read Depth 110.07_Gb(PacBio), 43Gb(Hi-C)
Assembly Method Canu v.2.2 Estimated Genome Size (Mb) 470
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Qingfeng Wang (Chinese Academy of Sciences) Data Source China National GeneBank
DOI/PMID 10.1038/s41477-022-01187-x Data Source URL https://db.cngb.org/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:95.2%[S:86.5%,D:8.7%],F:1.6%,M:3.2%,n:1614 BUSCO Gene (pep/cds) C:94.7%[S:86.8%,D:7.9%],F:1.2%,M:4.1%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format