Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Prunus mandshurica , Manchurian apricot , マンシュウアンズ

Prunus mandshurica

Genome Assembly ID:t122122.G001

Sequence Name:pMandshurica_CH264_4_v1.0

Details of the Assembled Genome Sequences

Assembly Name pMandshurica_CH264_4_v1.0 Biological Sample Chinese accessions CH264.4
Number of Sequences 8 Number of Chromosomes NA
Total Length (bp) 223,661,229 N50 Length (bp) 29,447,199
Number of Genes 41,386 Number of Genes Source File Prunus_Mandshurica_peptide.fasta.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore Read Depth 139x
Assembly Method SMARTdenovo (git commit 5cc1356), Ra (git commit d388a2f) Estimated Genome Size (Mb) 231.77_
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author V_ronique Decroocq (University of Bordeaux) Data Source GDR: Genome Database For Rosaceae
DOI/PMID 10.1038/s41467-021-24283-6 Data Source URL https://www.rosaceae.org/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:94.3%[S:90.4%,D:3.9%],F:0.9%,M:4.8%,n:1614 BUSCO Gene (pep/cds) C:91.0%[S:78.4%,D:12.6%],F:2.1%,M:6.9%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format