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アセンブル , シーケンス , Assemble , Sequence , Amaranthus cruentus , Grain and leaf amaranth , スギモリゲイトウ

Amaranthus cruentus

Genome Assembly ID:t117272.G001

Sequence Name:Amacr_genome

Details of the Assembled Genome Sequences

Assembly Name Amacr_genome Biological Sample Arusha
Number of Sequences 625 Number of Chromosomes n = 17
Total Length (bp) 370,913,848 N50 Length (bp) 21,701,286
Number of Genes 25,477 Number of Genes Source File Amacr_pep_20210312.fasta.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, Oxford Nanopore, Hi-C Read Depth 24.5 Gb(Oxford Nanopore), 110 Gb(Illumina),120 Gb(Hi-C)
Assembly Method WTDBG2 Estimated Genome Size (Mb) 399
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Katherine J. Denby (University of York) Data Source the AOCC portal of ORCAE
DOI/PMID 10.1111/tpj.15298 Data Source URL https://bioinformatics.psb.ugent.be/orcae/overview/Amacr
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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