Sequence Name:AYv1.1
Assembly Name | AYv1.1 | Biological Sample | ecotype Malutang |
Number of Sequences | 280 | Number of Chromosomes | 2n = 2x = 26 |
Total Length (bp) | 665,887,899 | N50 Length (bp) | 44,917,698 |
Number of Genes | 28,320 | Number of Genes Source File | final.gene.pep.faa |
Number of Genes Annotated by Hayai-annotation | 28,320 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio, Sequel | Read Depth | 100x |
Assembly Method | SMARTDENOVO v. 1.0 | Estimated Genome Size (Mb) | 640 |
Sequencing Method Comments | NA | Comments | Tree species endemic to China |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Yongpeng Ma (Chinese Academy of Sciences), Weibang Sun (ditto) | Data Source | GIGA DB |
DOI/PMID | 10.1093/gigascience/giz085 | Data Source URL | http://gigadb.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.7%[S:94.9%,D:3.8%],F:0.6%,M:0.7%,n:1614 | BUSCO Gene (pep/cds) | C:92.8%[S:89.6%,D:3.2%],F:2.5%,M:4.7%,n:1614 |