Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d054105_T014
CDS Infomation

cds chromosome:B73_RefGen_v4:4:246608665:246613906:-1 gene:Zm00001d054105 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uridine kinase

Sequence

ATGGGTTCGAAATCGGTAGACGAGGTGCTCGACGCCGCCGCCGCCGGAGTCCATTACTCC
GCACTCCGTCTGGACGGCCAGGCTTCCGCAACGACGTCTGGCCTGGAGAACGGCCACCAG
GAGCCCTTTGTCATTGGTGTTGCTGGGGGTGCATCGTCAGGCAAGAGTACCGTGTGCAAG
ATGATCATTGATCAGCTCCGTGACCAGCGTGTCGTGGTTGTTACGCAGGAGTCCTTTTAT
TATGGATTGACGGATGAAGAATTAGTACATGTCCATAATTATAACTTTGATCATCCAGAC
GCATTTCATACAGAGCTACTTCTCTCTTGTATGCAAAACTTGAAATGTGGCAAAGCTGTT
GACATCCCTAACTACAACTTCAAGACATACAAAAGTGTCCCAAATGCAAGGAAGGTTAAT
CCTTCGGATGTTATTATTTTGGAAGGAATTCTAGTTTTTCATGATTCACGCCTCAGGGAT
TTGATGAACATGAAGATTTTCGTTGATACAGACGCTGACGTACGGTTAACAAGGAGGATC
CATCGTGATACCATTGACAAGGGTAGAGATCTCAAAGCTGTGTTAGAACAGTTCTCAAAA
TTTGTTAAGCCTGCTTTTGAAGACTTCATCCTCCCAACGAAGAAGTATGCTGATGTTATC
ATCCCACGCGGAGGAGACAATGATGTGGCAATTGACCTAATCGTTCAGCATATTCGGACT
AAACTTGGACAACATGATCTTCGTAAAATACACCCTAATCTGTATGTAATTCAGACTACT
TATCAGATACGAGGCATGCACACAATAATAAGGGATGCTGCCACAGCAACACATGATTTC
ATATTTTATGCTGATCGGTTGATTCGATTGGTCAGTATATAA

Peptide Sequence

PEP ID

Zm00001d054105_P014
PEP Infomation

pep chromosome:B73_RefGen_v4:4:246608665:246613906:-1 gene:Zm00001d054105 transcript:Zm00001d054105_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uridine kinase

Sequence

MGSKSVDEVLDAAAAGVHYSALRLDGQASATTSGLENGHQEPFVIGVAGGASSGKSTVCK
MIIDQLRDQRVVVVTQESFYYGLTDEELVHVHNYNFDHPDAFHTELLLSCMQNLKCGKAV
DIPNYNFKTYKSVPNARKVNPSDVIILEGILVFHDSRLRDLMNMKIFVDTDADVRLTRRI
HRDTIDKGRDLKAVLEQFSKFVKPAFEDFILPTKKYADVIIPRGGDNDVAIDLIVQHIRT
KLGQHDLRKIHPNLYVIQTTYQIRGMHTIIRDAATATHDFIFYADRLIRLVSI

Transcript Sequence

Transcript ID

Zm00001d054105_T014
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:246608665:246613906:-1 gene:Zm00001d054105 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uridine kinase

Sequence

GCCGCGCCGAGCACGCCTCTCCCTCCCTCGATCCAGATCCACCCCATACCTCCGCGGCGC
CACCCCTTCCCGCTCCTTCTAGCCGGCGTCGGCGCGGGCCGGAGATCTGTTTTCTCCGGT
AGGAAAAATCCTATTGCGATCTAAATATGGGTTCGAAATCGGTAGACGAGGTGCTCGACG
CCGCCGCCGCCGGAGTCCATTACTCCGCACTCCGTCTGGACGGCCAGGCTTCCGCAACGA
CGTCTGGCCTGGAGAACGGCCACCAGGAGCCCTTTGTCATTGGTGTTGCTGGGGGTGCAT
CGTCAGGCAAGAGTACCGTGTGCAAGATGATCATTGATCAGCTCCGTGACCAGCGTGTCG
TGGTTGTTACGCAGGAGTCCTTTTATTATGGATTGACGGATGAAGAATTAGTACATGTCC
ATAATTATAACTTTGATCATCCAGACGCATTTCATACAGAGCTACTTCTCTCTTGTATGC
AAAACTTGAAATGTGGCAAAGCTGTTGACATCCCTAACTACAACTTCAAGACATACAAAA
GTGTCCCAAATGCAAGGAAGGTTAATCCTTCGGATGTTATTATTTTGGAAGGAATTCTAG
TTTTTCATGATTCACGCCTCAGGGATTTGATGAACATGAAGATTTTCGTTGATACAGACG
CTGACGTACGGTTAACAAGGAGGATCCATCGTGATACCATTGACAAGGGTAGAGATCTCA
AAGCTGTGTTAGAACAGTTCTCAAAATTTGTTAAGCCTGCTTTTGAAGACTTCATCCTCC
CAACGAAGAAGTATGCTGATGTTATCATCCCACGCGGAGGAGACAATGATGTGGCAATTG
ACCTAATCGTTCAGCATATTCGGACTAAACTTGGACAACATGATCTTCGTAAAATACACC
CTAATCTGTATGTAATTCAGACTACTTATCAGATACGAGGCATGCACACAATAATAAGGG
ATGCTGCCACAGCAACACATGATTTCATATTTTATGCTGATCGGTTGATTCGATTGGTCA
GTATATAAATGTATTTGATGAGTTATCTTTTATGTGGGTTTGCATGGTATCGTAAAACTC
CCTGTGAAAAATAGGTTGTCGAACATGGTCTTGGTCATCTTCCTTTCCAGGAAAAGCAGG
TCATCACTCCGACTGGTAAGCAGGTCCTCTATTATATAGTTCCCTGTTTTCTTCGTGCAT
ATAAGTTTTCTCTTCAAATGAAATGCGAGTACATGTTCAAGATAATGTAGTAAAATATAA
AGTGTATGTGGTTGTTGAATCGTGACGACTGCATGCACTATCATCCTACTTGTATTTGGT
ATTGATCCTTGTTAGCTAATTCATTAGCTTGCACATCAGCAAAAAAACAATGACCATTTG
CTTAGGATATCTAATTGAGAAGGTTGAACAATATTTTTACTGGTCCAGGTAACGAGGTTT
GGTATGGCCAGAATACCAGTATAGTTTTTCCTTGACTGACATGCACTAATTTATACTTAT
GATCTGGCAAATTCTGTACTAAAGTGTGAATTAGACTTGCTAGTGGTGTGGTCAGAATCC
CAGGATAATTTTTTCTTGACTGACATGCACTAGTTTATACAGATGATCAGGCAAATTCTG
TGCTTAAGTGTGAATTAGACTTGCTAGTTGCTACAATGATTTGTCTCGCACTCACTTGTT
TATTGTTGCTTGCTTACTCGGAAGTCTCTGGTCTAGAGTCATAGGAAAACTTTGACATGG
TTGGTACAAATAGAAAAGGTGATTATTATTGCTAGTGGGACATTGGTTTATCTCCCTCGG
CAGTCCATTTGCTCTCTTGTAACTTAAGTATGTGGTGGAATTACATGTGTTTGTATTCTC
TGTGATCAGTACTTCATATTTCCCTGTCACACTTTATTATGTATGCAGGGTCTGTTTACA
CTGGTGTGGAGTTCTCCAAAAGGTTGTGTGGTATCTCAGTGATCAGGAGGTACCAACTTT
TCCTAAACGATATTTTCTTCATATGCCTGTTTAGGTTCTAATCGAGTTAATGATTTAGGC
ACTCACATAAGGAGGGGGAAATGAGCTTTGTACAAGTATAACAGTGATATCATTATGTTG
ATACTATGCCTTAGATAGCCTGTGAATTATTTTTTGCCGCATTGGCACTTCACAAATGCT
CGACACTTGGCCATATTGAAAACTTCATCCCAGTCTCAGTTATCTTTGCTATATATATGT
ACTGTTCATTGTTCCTACAAATACAGTATGGTTGTTTTAGCTATAAAACATGCACAATTG
ACCCCTCATGCACTAGAATTCAATTCATCAGTCATCACAAGAACATCTATGTACTCTACA
AATGATTTGCTACAACTGGTTTCCAGTGGCGAAAGTATGGAGAATGCACTACGTGCATGC
TGTAAAGGTATAAAGATTGGGAAGATTCTTATTCATCGGGAAGGTGACAATGGACAACAG
GTCTGGCTTATCAACTTTTGCCATGTGTTAGGGTGAGTCAAATTACTAAGATCTAAATTT
CTTTGCAGCTCATCTATCAAAATTTACCAAAAGATATTGCAAATAGGCATGTTCTGCTGT
TGGACCCCATATTGGGAACAGGTACGTTTTTTTATTCCTGTTCTCTGGACGGCACCACTT
TTCATGTCAATTAAATTTTATAAAAACTTCAAATCACTCTTCCACGCACATGAGTACCAT
CTTGTCTGATTCAATAAGCAAAATAGAACTGCACTAGAAGTTTCCTTTCTTATTAAGGTA
ACTTTGTATTGATTAGCAAATCGTAGGTTTTATGCCCTTCATCAATCGACGGGATGGTTT
CCAATGTAAATCAGTAAATGTCGTCCCTCATACATTTTCCATATATTGAGCTGAATAAAT
TTGAATACTTTTAAGAGCCCAACATAGATTTCTGAATGTTTGGGTATTTTGGCATCATCA
TTAATAAAAGCACAATTTGATCGAAATTTAATGTGTTCTCTGTAATTTTGTTATAGGTTA
AGTATGGTTTGCCTCATTAAGAGGGAACATGCATTACTATTTTTATATTTCTTGTTATCT
CATTCAATCTCCATTTTATCCTGATCAGGAAACTCAGCAGTTCAAGCCATCTCCCTTCTA
TTAAAGAAGGGTGTACAGGAAGCAAATATCATATTTCTTAATCTTATTTCAGTAAGTCCT
ATGAAGTCCTGGACATTTTCTTGCTAGTCTTTGGAGCTTATCGGATTGAAATATAATTTT
TTTTTCTATTCCCTATTGGAGTACCATGGATTACTGGAATATATCTTTTAGCTTGGTTGT
CTTCTAGCCTTTTCATCTAAACTGTCCATTGTAACTACCATCACAGAAGCAATTTTGTAA
CTTCATCTACTAGTTAATGAAAATCTCTAGGTAACGAATATACCT