Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d054089_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:246276749:246281182:-1 gene:Zm00001d054089 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein isoform 1%3B Putative TCP-1/cpn60 chaperonin family protein isoform 2
Sequence	ATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCATTAAACATGCACCTGCCGGCGTT GCGCTTGCTGCGCCCATGAAGCACCTTTCCCTCGTCTCGCCCTCGCTGGTTTCGCTTCCG CGCAAGATGAGGCCGCGAAGGAAGTACAACTTCAGGGTAAACGCTGCAAAGGAGCTGCAT TTCAACAAGGATGGCTCGGCTATCAGGAAAATGCAAAATGGGGTCAACAAGCTTGCAGAT CTCGTCGGGGTTACTCTTGGACCAAAGGGGCGAAATGTAGTCCTCGAAAGCAAGTATGGC TCACCTAAAATTGTCAATGATGGTGTCACTGTGGCAAAGGAGGTTGAACTTGAGGACCCT GTTGAAAATATTGGTGCTAAATTGGTCCGCCAAGCTGCTGCTAAAACAAATGACTTGGCT GGTGATGGGACAACCACTTCGGTTGTCCTTGCTCAAGGGATGATTACTGAGGGTGTAAAG GTTGTAGCTGCTGGTGCTAATCCAGTGCAGATCACCCGTGGTATTGAGAAAACAGCCAAA GCACTAGTCAGTGAACTCCAAAAGATGTCCAAGGAGGTTGAGGACAGTGAGCTTGCTGAT GTTGCTGCAGTTAGTGCGGGAAATAACTATGAAATTGGGAATATGATAGCTGAGGCTATG AAAAAGGTTGGGCGGCAGGGAGTGGTCACACTTGAAGAAGGAAAGAGTGCTGAAAATAAC CTCTATTCTGTTGAGGGAATGCAGTTTGACCGTGGCTATATTTCTCCCTACTTTGTGACT GACAGTGAAAAAATGACAGTCGAGTATGAGAACTGCAAGCTTCTCCTTGTGGACAAGAAA ATTAACAATGCCAGAGATCTTATCACTATCCTGGAGGATGCTATTAGAAGTGGATATCCA ATTCTAATAGTGGCAGAGGACATTGAGCAGGAAGCTCTTGCAACCCTTGTGGTTAATAGG CTTAGAGGTGCATTGAAGATTGCTGCTATTAAGGCCCCTGGTTTTGGAGAGCGCAAAAGT CAATATCTTGATGACATTGCTACTCTCACTGGAGGCACTGTCATCAGAGAAGAAGTTGGA TTATCCTTAGACAAGGCAGACAATGCGGTCCTAGGAACTGCTGCTAAGGTTGTAGTTACC AAGGATTCAACAACAATAGTGGGAGATGGCACTACACAGGAGGAAGTGAACAAAAGGGTG ACACAAATCAAGAACCAGATTGAGGCTACTGAACAAGAATATGAGAGAGAAAAACTAAAC GAGAGGATAGCTAAACTCTCTGGTGGTGTTGCTGTCATTCAGGTAGGAGCACAGACAGAA ACTGAGCTCAAGGAAAAGAAATTGAGGGTTGAGGATGCCCTGAATGCTACAAAGGTAAAT GCTACATATGGTGGTTCTCACAGTATACCTGCAGCAGTCGAGGAAGGTATCGTTGTAGGT GGTGGCTGTACCCTTTTGAGGCTTGCATCAAAAGTTGATGCAATTATAGAGACCCTTGAG AACGATGAACAGAAGGTTGGGGCTGAAATTGTAAGGAAGTCCTTGAGCTATCCACTTAAA TTGATTGCAAAAAATGCAGGCGTTAATGGCAGTGTGGTTACTGAGAAGGTTCTTGCCAAT GAGAACTTCAGGTATGGGTACAATGCGGCTACAGGGGAGTATGAGGACTTGATGGCTGCT GGTATCATTGATCCCACCAAGGTTGTGAGGTGCTGCTTGGAGCATGCTGCATCGGTGGCG AAAACCTTCATCACCTCTGATGCCGTTGTTGTTGACGCCAAGGTGGCTGAGCAAGCACCA TCATCTCCTGCAAACCCAATGGCAATGGGTGGTGGCTCAGGTTTTGGGTTCTAA

Peptide Sequence

PEP ID	Zm00001d054089_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:246276749:246281182:-1 gene:Zm00001d054089 transcript:Zm00001d054089_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein isoform 1%3B Putative TCP-1/cpn60 chaperonin family protein isoform 2
Sequence	MASAFGTASTCGIKHAPAGVALAAPMKHLSLVSPSLVSLPRKMRPRRKYNFRVNAAKELH FNKDGSAIRKMQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAK ALVSELQKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMKKVGRQGVVTLEEGKSAENN LYSVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKINNARDLITILEDAIRSGYP ILIVAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEVG LSLDKADNAVLGTAAKVVVTKDSTTIVGDGTTQEEVNKRVTQIKNQIEATEQEYEREKLN ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKVNATYGGSHSIPAAVEEGIVVG GGCTLLRLASKVDAIIETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLAN ENFRYGYNAATGEYEDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDAKVAEQAP SSPANPMAMGGGSGFGF

Transcript Sequence

Transcript ID	Zm00001d054089_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:246276749:246281182:-1 gene:Zm00001d054089 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein isoform 1%3B Putative TCP-1/cpn60 chaperonin family protein isoform 2
Sequence	GACCGATCTCTCTTTCCACTCCTCTCTTAAACCCTAGCCGCTGCGCACAACAACCTGCTA CTCAATTTGATCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCATTAAACAT GCACCTGCCGGCGTTGCGCTTGCTGCGCCCATGAAGCACCTTTCCCTCGTCTCGCCCTCG CTGGTTTCGCTTCCGCGCAAGATGAGGCCGCGAAGGAAGTACAACTTCAGGGTAAACGCT GCAAAGGAGCTGCATTTCAACAAGGATGGCTCGGCTATCAGGAAAATGCAAAATGGGGTC AACAAGCTTGCAGATCTCGTCGGGGTTACTCTTGGACCAAAGGGGCGAAATGTAGTCCTC GAAAGCAAGTATGGCTCACCTAAAATTGTCAATGATGGTGTCACTGTGGCAAAGGAGGTT GAACTTGAGGACCCTGTTGAAAATATTGGTGCTAAATTGGTCCGCCAAGCTGCTGCTAAA ACAAATGACTTGGCTGGTGATGGGACAACCACTTCGGTTGTCCTTGCTCAAGGGATGATT ACTGAGGGTGTAAAGGTTGTAGCTGCTGGTGCTAATCCAGTGCAGATCACCCGTGGTATT GAGAAAACAGCCAAAGCACTAGTCAGTGAACTCCAAAAGATGTCCAAGGAGGTTGAGGAC AGTGAGCTTGCTGATGTTGCTGCAGTTAGTGCGGGAAATAACTATGAAATTGGGAATATG ATAGCTGAGGCTATGAAAAAGGTTGGGCGGCAGGGAGTGGTCACACTTGAAGAAGGAAAG AGTGCTGAAAATAACCTCTATTCTGTTGAGGGAATGCAGTTTGACCGTGGCTATATTTCT CCCTACTTTGTGACTGACAGTGAAAAAATGACAGTCGAGTATGAGAACTGCAAGCTTCTC CTTGTGGACAAGAAAATTAACAATGCCAGAGATCTTATCACTATCCTGGAGGATGCTATT AGAAGTGGATATCCAATTCTAATAGTGGCAGAGGACATTGAGCAGGAAGCTCTTGCAACC CTTGTGGTTAATAGGCTTAGAGGTGCATTGAAGATTGCTGCTATTAAGGCCCCTGGTTTT GGAGAGCGCAAAAGTCAATATCTTGATGACATTGCTACTCTCACTGGAGGCACTGTCATC AGAGAAGAAGTTGGATTATCCTTAGACAAGGCAGACAATGCGGTCCTAGGAACTGCTGCT AAGGTTGTAGTTACCAAGGATTCAACAACAATAGTGGGAGATGGCACTACACAGGAGGAA GTGAACAAAAGGGTGACACAAATCAAGAACCAGATTGAGGCTACTGAACAAGAATATGAG AGAGAAAAACTAAACGAGAGGATAGCTAAACTCTCTGGTGGTGTTGCTGTCATTCAGGTA GGAGCACAGACAGAAACTGAGCTCAAGGAAAAGAAATTGAGGGTTGAGGATGCCCTGAAT GCTACAAAGGTAAATGCTACATATGGTGGTTCTCACAGTATACCTGCAGCAGTCGAGGAA GGTATCGTTGTAGGTGGTGGCTGTACCCTTTTGAGGCTTGCATCAAAAGTTGATGCAATT ATAGAGACCCTTGAGAACGATGAACAGAAGGTTGGGGCTGAAATTGTAAGGAAGTCCTTG AGCTATCCACTTAAATTGATTGCAAAAAATGCAGGCGTTAATGGCAGTGTGGTTACTGAG AAGGTTCTTGCCAATGAGAACTTCAGGTATGGGTACAATGCGGCTACAGGGGAGTATGAG GACTTGATGGCTGCTGGTATCATTGATCCCACCAAGGTTGTGAGGTGCTGCTTGGAGCAT GCTGCATCGGTGGCGAAAACCTTCATCACCTCTGATGCCGTTGTTGTTGACGCCAAGGTG GCTGAGCAAGCACCATCATCTCCTGCAAACCCAATGGCAATGGGTGGTGGCTCAGGTTTT GGGTTCTAAATTGTTCAGCTGCCCTTCGTTCCATCGCAGCGACAGAATCTTAGTTTCGAG ATATAATAATAAATTGGATGATGTTAGTTTCGAGATATTAGTTGGATGTTGTTATTGTTG TCTCAAATTATAAAAAATCAAGTGCAAGTAACCAAGACAGCTGAAAAAAATAGTTTTGAT GAGATGCTGCTTCGTTTTTCTTTTCTACTATATTGGTGTGTTGGAAATAGTTTTGATGAG ATGCTGCTTCGTTTTTCTACTATAATATTGCAAGTAACCAAGCAGCCAGTGTTCAGCTAT GCACTTGCCATCCTCTGGCAATACAAGTTGGTCCCAAT