Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d054076_T052
CDS Infomation

cds chromosome:B73_RefGen_v4:4:245960244:245967119:-1 gene:Zm00001d054076 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transport protein SEC16B homolog
Sequence

ATGTCTTTGGAGGCCATGTACCCTGGGTGGAAGTATGATGAGGCCTCCCAGCAATGGTAC
CAGCTTGACGACAGTGTAAATTCAACTGGGAATGCAGCTCAGGTGCTGGACAACAGCACT
CGGTATGCACAGCAGCAGCAGCAGCTCCACGCCTCTTATCTGCACAATTCAGTGCATTCA
GGGCTTGAGACAATTGCTGAGGAGGGCACTACCGCAACCGGTGCTGTCTCAAGTTGGGGC
CAAGGGGCTGCCTCAGAGTACCCACCCAACATGCTCTTCTATGCAGAGTACCCTGGTTGG
TACTTCGACACCAACACCCAGCAGTGGCACTCCCTCGAGTTATACCAGCAGGCCGCCATG
CAGGCTGGAACAGCTAGCATGGGCCAGACTGTTATTGCAAACGACGGTGTTGCTGCAACT
TCCTCTCTGACAGGCTATAATGCCGCACAAAATGAGGACCTTGCTGCCCATGATCAGGTC
ACCCAACACAACTCATTCTCGAATAGTTTCGCTCATCAGAACCAATGGCAGATTACCGAT
GCATTTGGTAACAATGTACGATCTGAATGTGCTACAGAGAACAGCCTGGCTAGTAGTTCC
TATGGTTTTCAACAACACAGGAATGCTGATTCTACCAGTTCATCTACGAACCAACGGGCT
GGTTTTAATGCAGCTGAAACTGTTACTGATCACTATGGTGGACGCAAGGGCGTTGAATCG
CCAAGTATTCAGAGCGGTTATAGCACTTCTGACATTCAACAATCCAGTCACAAGGCATTC
GAACCTTACACGGGTTATCAGGACCATTACAAAGCATTTGAACCTGCCACAGGTCACCAT
GCCAGTAACAACATGTTCAAACAGTCCACAGGTAACCAGGGAGGTTACAAGGCGTTTGAA
CCTGCCATGGATAACCAGAGTGGCTACAAGGCATATGAACCTTCTATGGGTCACCATAGT
GCTTCCTGGGAACCCGTGCCTTCCACGGGTCACCAGACTGATTTCAAGGGGTCCGGAGCT
TCAACTGTTCATCAGGCCGGATACAAAGAATTTGAAACTTCTACAGGTTACAATACAAGT
TTAAAGGCATTTGAACCTTCTTCATCTCAACATGCTGGTTACATGGGTTCCCAATCTAAC
TACATGGGATTTGACACTTCTACAAACCACCATGGTTATGGCGATGCAAATGTTGTTGCG
AGCACTCAAGGCTTTGTCCCAATGCAAACCACATACCAGGGACAGACACAAGCAATTGCA
AACTCACAAGTGCACCTGTCAAATAGCTATTTGGGTATTGACAACTCCATGAACTTTAAT
CAGCAGCAATTTCTGGGTGCAAATGCCTCAAACTTGCAATTCAGTCACTCCCCACATGAT
GGTAGAGCTGGACGACCACCACATGCTCTCGTTTCTTTTGGGTTTGGAGGGAAGCTCATA
GTTATGAAAGAAGCTAGCTCCATGCCCGCAAGCTTTAACAATGGAATTCAGGGTAACTCT
AGTGGCACAGTTTCAGTTCTTAATCTGTCAGAGGTGGTCATGGATAAAATTGATTCTTCA
AGCATCACTAATGGTAGTGCACTTAGTTATTTCCATGCTCTGTGCCGCCAACCAGTTCCT
GGTCCTCTGGTTGGTGGAAGTGCTGCATCAAAGGATGTAAATAAGTGGATTGATGAAATG
ATTGCATGGTACGATTCTTCTAGTGAACTCCAGAGAAGTGATACTCGCAAGTTGCTTATT
TCATTGCTGAAGATACTGTCTCAGCACTATGGAAAACTCCGTTCACCTTTTGCGTCTGAC
CCATCACAAGAGGAGACAGATGGTCCAGAAATGGCAGTAACTAAGCTATTTTCATCGTTT
AAAAGTACTGTTAATATGGGAGATTATGGATCCATTGTTTCTTGCATGAAAAATATTCCT
TCAGAAAGTCAGATGCAGGCTGTTGCACAGGAGGTCCAAAATCTTCTAGTTTCTGGGAGA
AGAAAAGAGGCCCTTCAGTGTGCCCAGGGAGGTCAACTTTGGGGACCTGCAATCATACTG
GCATTGCAGCTCGGTGATATGTTTTATGTGGATACAGTGAAGAAAATGGCTCACTTCCAT
TTTGTATCGGGGTCCCCTCTGCGAACGCTATGCCTTCTGATTGCTGGACAACCTGCAGAT
GTTTTTAATGTAGATAACAATGTCAACATTGACTATGGTACATCCCATCAACCTATGGAG
GTACTTGCAAAGTTAATGGTTTTTAATTGTTTTTGCTGA

Peptide Sequence

PEP ID

Zm00001d054076_P052
PEP Infomation

pep chromosome:B73_RefGen_v4:4:245960244:245967119:-1 gene:Zm00001d054076 transcript:Zm00001d054076_T052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transport protein SEC16B homolog
Sequence

MSLEAMYPGWKYDEASQQWYQLDDSVNSTGNAAQVLDNSTRYAQQQQQLHASYLHNSVHS
GLETIAEEGTTATGAVSSWGQGAASEYPPNMLFYAEYPGWYFDTNTQQWHSLELYQQAAM
QAGTASMGQTVIANDGVAATSSLTGYNAAQNEDLAAHDQVTQHNSFSNSFAHQNQWQITD
AFGNNVRSECATENSLASSSYGFQQHRNADSTSSSTNQRAGFNAAETVTDHYGGRKGVES
PSIQSGYSTSDIQQSSHKAFEPYTGYQDHYKAFEPATGHHASNNMFKQSTGNQGGYKAFE
PAMDNQSGYKAYEPSMGHHSASWEPVPSTGHQTDFKGSGASTVHQAGYKEFETSTGYNTS
LKAFEPSSSQHAGYMGSQSNYMGFDTSTNHHGYGDANVVASTQGFVPMQTTYQGQTQAIA
NSQVHLSNSYLGIDNSMNFNQQQFLGANASNLQFSHSPHDGRAGRPPHALVSFGFGGKLI
VMKEASSMPASFNNGIQGNSSGTVSVLNLSEVVMDKIDSSSITNGSALSYFHALCRQPVP
GPLVGGSAASKDVNKWIDEMIAWYDSSSELQRSDTRKLLISLLKILSQHYGKLRSPFASD
PSQEETDGPEMAVTKLFSSFKSTVNMGDYGSIVSCMKNIPSESQMQAVAQEVQNLLVSGR
RKEALQCAQGGQLWGPAIILALQLGDMFYVDTVKKMAHFHFVSGSPLRTLCLLIAGQPAD
VFNVDNNVNIDYGTSHQPMEVLAKLMVFNCFC

Transcript Sequence

Transcript ID

Zm00001d054076_T052
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:245960244:245967119:-1 gene:Zm00001d054076 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transport protein SEC16B homolog
Sequence

GTGGCGCGATGCGACGTCGGCTGTCGTGCTCGTGACCGCAGCCGCGCCTTCCCGCCTCCA
CCTCCTCCTGGCGGCGGCAGCACTGCAGTGGATTCAGCAGATCCCATGTCTTTGGAGGCC
ATGTACCCTGGGTGGAAGTATGATGAGGCCTCCCAGCAATGGTACCAGCTTGACGACAGT
GTAAATTCAACTGGGAATGCAGCTCAGGTGCTGGACAACAGCACTCGGTATGCACAGCAG
CAGCAGCAGCTCCACGCCTCTTATCTGCACAATTCAGTGCATTCAGGGCTTGAGACAATT
GCTGAGGAGGGCACTACCGCAACCGGTGCTGTCTCAAGTTGGGGCCAAGGGGCTGCCTCA
GAGTACCCACCCAACATGCTCTTCTATGCAGAGTACCCTGGTTGGTACTTCGACACCAAC
ACCCAGCAGTGGCACTCCCTCGAGTTATACCAGCAGGCCGCCATGCAGGCTGGAACAGCT
AGCATGGGCCAGACTGTTATTGCAAACGACGGTGTTGCTGCAACTTCCTCTCTGACAGGC
TATAATGCCGCACAAAATGAGGACCTTGCTGCCCATGATCAGGTCACCCAACACAACTCA
TTCTCGAATAGTTTCGCTCATCAGAACCAATGGCAGATTACCGATGCATTTGGTAACAAT
GTACGATCTGAATGTGCTACAGAGAACAGCCTGGCTAGTAGTTCCTATGGTTTTCAACAA
CACAGGAATGCTGATTCTACCAGTTCATCTACGAACCAACGGGCTGGTTTTAATGCAGCT
GAAACTGTTACTGATCACTATGGTGGACGCAAGGGCGTTGAATCGCCAAGTATTCAGAGC
GGTTATAGCACTTCTGACATTCAACAATCCAGTCACAAGGCATTCGAACCTTACACGGGT
TATCAGGACCATTACAAAGCATTTGAACCTGCCACAGGTCACCATGCCAGTAACAACATG
TTCAAACAGTCCACAGGTAACCAGGGAGGTTACAAGGCGTTTGAACCTGCCATGGATAAC
CAGAGTGGCTACAAGGCATATGAACCTTCTATGGGTCACCATAGTGCTTCCTGGGAACCC
GTGCCTTCCACGGGTCACCAGACTGATTTCAAGGGGTCCGGAGCTTCAACTGTTCATCAG
GCCGGATACAAAGAATTTGAAACTTCTACAGGTTACAATACAAGTTTAAAGGCATTTGAA
CCTTCTTCATCTCAACATGCTGGTTACATGGGTTCCCAATCTAACTACATGGGATTTGAC
ACTTCTACAAACCACCATGGTTATGGCGATGCAAATGTTGTTGCGAGCACTCAAGGCTTT
GTCCCAATGCAAACCACATACCAGGGACAGACACAAGCAATTGCAAACTCACAAGTGCAC
CTGTCAAATAGCTATTTGGGTATTGACAACTCCATGAACTTTAATCAGCAGCAATTTCTG
GGTGCAAATGCCTCAAACTTGCAATTCAGTCACTCCCCACATGATGGTAGAGCTGGACGA
CCACCACATGCTCTCGTTTCTTTTGGGTTTGGAGGGAAGCTCATAGTTATGAAAGAAGCT
AGCTCCATGCCCGCAAGCTTTAACAATGGAATTCAGGGTAACTCTAGTGGCACAGTTTCA
GTTCTTAATCTGTCAGAGGTGGTCATGGATAAAATTGATTCTTCAAGCATCACTAATGGT
AGTGCACTTAGTTATTTCCATGCTCTGTGCCGCCAACCAGTTCCTGGTCCTCTGGTTGGT
GGAAGTGCTGCATCAAAGGATGTAAATAAGTGGATTGATGAAATGATTGCATGGTACGAT
TCTTCTAGTGAACTCCAGAGAAGTGATACTCGCAAGTTGCTTATTTCATTGCTGAAGATA
CTGTCTCAGCACTATGGAAAACTCCGTTCACCTTTTGCGTCTGACCCATCACAAGAGGAG
ACAGATGGTCCAGAAATGGCAGTAACTAAGCTATTTTCATCGTTTAAAAGTACTGTTAAT
ATGGGAGATTATGGATCCATTGTTTCTTGCATGAAAAATATTCCTTCAGAAAGTCAGATG
CAGGCTGTTGCACAGGAGGTCCAAAATCTTCTAGTTTCTGGGAGAAGAAAAGAGGCCCTT
CAGTGTGCCCAGGGAGGTCAACTTTGGGGACCTGCAATCATACTGGCATTGCAGCTCGGT
GATATGTTTTATGTGGATACAGTGAAGAAAATGGCTCACTTCCATTTTGTATCGGGGTCC
CCTCTGCGAACGCTATGCCTTCTGATTGCTGGACAACCTGCAGATGTTTTTAATGTAGAT
AACAATGTCAACATTGACTATGGTACATCCCATCAACCTATGGAGGTACTTGCAAAGTTA
ATGGTTTTTAATTGTTTTTGCTGACATTTTGTTTGATTAACGATTGCATAATGTCTTGTT
TACTGCAGTGTCATGATTTTTGGGTATCACTTACCAATAATTTTCCTGCTTTTCTATTTA
CTTTCTTTTTTGATAATTTGTTTTTCCTGAGTCAGCCTGGTCCTAATGGTATGTTGGATG
ATTGGGAGGAGAATTTAGCTATTATTACTGCAAACAGAACGAAAGGTGACGATCTAGTAA
TCACCCATCTTGGTGACTGTCTCTGGAAAGAAAAAAATGAGATTGCAGCTGCTCATTCGT
GCTATTTAGTTGCCGAACTAAATATTGATTCATACTCGGAAAGCGCAAGGTTGTGCCTCA
TTGGTGCAGATCACTTGAAGTGTCCTCGAACATTTGCCAGCCCTGAAGCCATTCAGAGGA
CAGAGGTTTATGAATACGCGAAGGTGCTTGGTAATTCTCAGTATATCCTACTACCCTTTC
AGCCATATAAGCTGATATATGCATACATGCTTGTTGAAGTGGGGAAGGTTTCTGATTCTT
TGAGGTATTGCCAAGCGTCTATGAAGGTATTGAAAGCCTCTGGCCGTGCCCCTGAATTGG
AGGTGTGGAAGCAATTAATTTCTTCACTGGAGGAGAGGATACGCACTCACCAGCAGGGTG
GATATGGCACAAATCTTGCCCCAGCAAAACTAGTTGGGAAGATTTTTACCTCGCTTGATA
AATCTATATCCCGCATGATGGGTACACCATCTGCACCACTTCCACCATTGCCACATGGAT
CTGTTAGCGATAGAGAGAGCCACTCTATGCCTGAAGCAGCAAAATTTATAAATAGCCAAT
CAGTAATGGCCATGTCATCGCTAATGCCATCTGCTTCAATGCAGTCAATGACTGAGATAG
CAGAGAATAGTGATGGCACTGGCAGGAAAATGGCACACAACAGAAGTGTTTCTGAGCCAG
ACTTCGGTAGAACATCAAAACAGGGTGGTGGATCAGATGGCACACAGAGCAGTGCAGCAG
GATCTGGCAGTTCTCGATTTGGTTGGCTAGTGCAGAAGACTATGGGATTAGTGTCAAAAT
CTCACCGCCAGGCAAAATTAGGGGATCAGAACAAATTTTACTATGATGAAAAGTTGAAGC
GGTGGGTGGAAGAAGGTGCTGTGGTTCCTGCCGAGGAGCCTCCTCTTCCTCCCCCTCCAA
CAAAATCATCTTTCCAGAATGGTATGCCAGACCATAAGTTGAATGGCCACATGAGCGTAG
GCCATGCTCCCAGTGGAGTCACAGAATGGAAATCCTCAAATTATTCAGAGCAAGGTCTGG
GTATGCCGCCAATTCCACCTAGCCAAAACCAGTTTTCTTCTCGTGGGCGGATGGGTGTCC
GATCCAGATATGTTGACACATTCAATAAATCAGGTGCATCTGGAGCGGTGCCATCATATA
ACAAACCAGCTGCTCCATCCGTGACACCACCAGCTGGTGCCAAGTTCTTCATACCGACTG
CAGCACCTGTTGCTGCAGATCAGATGATGCCACACCAAGCAGCAGAGATACACAGTGAAA
CCATGCAACAGGATGAGAGGGCAGCCTCACCGCCTGCTGGAACATCATTCTCTTCAACCC
CACCACCCACACAATTTTCATCGCCCCCACCACACACGCAATTCTCGTCACCAATGCAAT
CAACAATCCATCGGCAATCTAGTATGGCGAACATCTCCACCCCTTACCAGAGTTCCGGGG
TATCATCATTAAGCAGCGACACCTCATTCTCAAAATCACGAGCTGCATCCTGGAGTGGAA
CATACTCTGAGCAGTTCAGTGCTTTTGCGGGCACAAGATCACCCGATGGACAGACGGTGC
GCTCACCACTCATGCCTGGCAAACCATCACACAGTCGTTCCAACAGCAACTCATCAGTGC
AGCTCAATGGATTGACAGAGGATCTTCATGAGGTCGAGCTCTAATTGGCGGCTGCTCAGC
ATGACTGTCGTCTTTTATCCACCACAAAAGGCAGCCATAACAACCCCTGATAAACCCCTT
CCCAAGCGGGTGACAGAAAAAAAAGGTGCCCACGAAATGCTGATCACGGGGGACGCTGCA
GTTGGAATGGGCATGTGGGACTTTTGCACGAGATTCTGGGGTGCGCTCTAAACCACCAAG
GTATGTCAGACATGTACTAACAGAAATAGAAATGCGGGGGGTTTTGGACATTTTGTAGCT
ATATATATATATATGTGTGTGTGTTTTGTTTTATGTTTTAGAGAGAAGGGAAAGAGTTGG
GCTGGCCTCGTTTACAGGTGAGAAAAATGGAGCAGGAGCCGCATGCAGATGCCCTTGTAC
AGATAATCTGCGCCTACCCAGTTTTTTTTTTTTTTAAAAAAAAAACGCGAACAAG