Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d054072_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:4:245925015:245928505:-1 gene:Zm00001d054072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C78 ubiquitin fold modifier-specific peptidase 1/ 2
Sequence

ATGGAGACGATCTCATCTTGTCCCATCTGCAACATACAAGTTCTTACGGCTGAGCTGGAA
TGGCATGCCAATAGCCACTTTGATGATGATCAACTCCAAATGGACATGGAATTAGCACAT
CAGATGTCAGTTGCTGAATCAAGTACAGATGCCATGAACGACCCAAAACATTATAGTGGA
TCATTCACTAGTGACTCTAACGCTCTAGGGGCTCTATCGAGTCATAGTGGATACTCGCAC
CATTACAGTGAGCTACTGGATGAACAAATCTCTTGCTTGGTCCGAGCACAAATTCGAAGC
AAAGTTCAAGAGGTGGAAGGCGGTATTTTGAGCTTGTTGAGGAGCTGCTTGGAGTCAGAA
GCGGGTTCCTCGACAAGTATGATATCGTGCTATATTGACCATCATCAGAGCCTTTCATCA
GAAGATAAGGGATGGGGATGTGGATGGAGGAACATTCAGATGCTGAGCTCTCATCTATTG
AAGCAAAGACCAGAAGCTAGAGAAGTATTATTTGGTGGTTCTGGATTTGTTCCTGACATC
CCTTCACTCCAGAGGTGGCTTGAGATTGCTTGGGACAAAAAATTTGATACAATTGGCTCC
AGCCACTTTCATAACAAAATTTATGGTGCCAAGAAGTGGATAGGGACCACAGAGTGCGCT
GCCCTCTTCCGCTCCTTTGGTCTCCGTGCAAGGATTGTAGATTTTGATAGCACAGAATCA
TCTGACCTCCATAGTAACAACGGAAGCCGTGCAGCGAGCCAAGTACGAGGACCTATGGAC
AAGTTCTTGATAAAGAATAAGCCTCCAAAATCATCATCTGAACTTTGTCGAGAGGATGCT
GAAAGTACGAGAGGCCAACAGGCCCTTGTTGACTGGGTTTGGAACTACTTTGCAAGTGAG
CGCTCTGACAGATTAGCCACACAGCGTGTCACTGTTAGCAATAAAACACCATTGTATTTC
CAACATCAAGGTCATTCAAGGACAATAGTTGGGATTCAAAAGAAACCGGATCGTCGTGGA
TCTCAAGAACAATACAGCCTTTTGATTTTAGATCCGGGCCATATCTAG

Peptide Sequence

PEP ID

Zm00001d054072_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:4:245925015:245928505:-1 gene:Zm00001d054072 transcript:Zm00001d054072_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C78 ubiquitin fold modifier-specific peptidase 1/ 2
Sequence

METISSCPICNIQVLTAELEWHANSHFDDDQLQMDMELAHQMSVAESSTDAMNDPKHYSG
SFTSDSNALGALSSHSGYSHHYSELLDEQISCLVRAQIRSKVQEVEGGILSLLRSCLESE
AGSSTSMISCYIDHHQSLSSEDKGWGCGWRNIQMLSSHLLKQRPEAREVLFGGSGFVPDI
PSLQRWLEIAWDKKFDTIGSSHFHNKIYGAKKWIGTTECAALFRSFGLRARIVDFDSTES
SDLHSNNGSRAASQVRGPMDKFLIKNKPPKSSSELCREDAESTRGQQALVDWVWNYFASE
RSDRLATQRVTVSNKTPLYFQHQGHSRTIVGIQKKPDRRGSQEQYSLLILDPGHI

Transcript Sequence

Transcript ID

Zm00001d054072_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:245925015:245928505:-1 gene:Zm00001d054072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C78 ubiquitin fold modifier-specific peptidase 1/ 2
Sequence

GGCCCGGCTCCCTCGCGCTCCTACCCCGGCCCCCAATTCCAATCTCGCCGCCGCCGGGTT
GCCGTCCTGTGCTCCGCTTCGCACCGCCGCACCGCTAGGAACAGCCCGTGCTGGAGCTGG
GGGAACGAACATCTCAACCTCCGTCACCCCCATACCGTACAAGTATTCCTATGGAGACGA
TCTCATCTTGTCCCATCTGCAACATACAAGTTCTTACGGCTGAGCTGGAATGGCATGCCA
ATAGCCACTTTGATGATGATCAACTCCAAATGGACATGGAATTAGCACATCAGATGTCAG
TTGCTGAATCAAGTACAGATGCCATGAACGACCCAAAACATTATAGTGGATCATTCACTA
GTGACTCTAACGCTCTAGGGGCTCTATCGAGTCATAGTGGATACTCGCACCATTACAGTG
AGCTACTGGATGAACAAATCTCTTGCTTGGTCCGAGCACAAATTCGAAGCAAAGTTCAAG
AGGTGGAAGGCGGTATTTTGAGCTTGTTGAGGAGCTGCTTGGAGTCAGAAGCGGGTTCCT
CGACAAGTATGATATCGTGCTATATTGACCATCATCAGAGCCTTTCATCAGAAGATAAGG
GATGGGGATGTGGATGGAGGAACATTCAGATGCTGAGCTCTCATCTATTGAAGCAAAGAC
CAGAAGCTAGAGAAGTATTATTTGGTGGTTCTGGATTTGTTCCTGACATCCCTTCACTCC
AGAGGTGGCTTGAGATTGCTTGGGACAAAAAATTTGATACAATTGGCTCCAGCCACTTTC
ATAACAAAATTTATGGTGCCAAGAAGTGGATAGGGACCACAGAGTGCGCTGCCCTCTTCC
GCTCCTTTGGTCTCCGTGCAAGGATTGTAGATTTTGATAGCACAGAATCATCTGACCTCC
ATAGTAACAACGGAAGCCGTGCAGCGAGCCAAGTACGAGGACCTATGGACAAGTTCTTGA
TAAAGAATAAGCCTCCAAAATCATCATCTGAACTTTGTCGAGAGGATGCTGAAAGTACGA
GAGGCCAACAGGCCCTTGTTGACTGGGTTTGGAACTACTTTGCAAGTGAGCGCTCTGACA
GATTAGCCACACAGCGTGTCACTGTTAGCAATAAAACACCATTGTATTTCCAACATCAAG
GTCATTCAAGGACAATAGTTGGGATTCAAAAGAAACCGGATCGTCGTGGATCTCAAGAAC
AATACAGCCTTTTGATTTTAGATCCGGGCCATATCTAGAAAGGTGTCTAAGAAGCAAAAA
AGGATGGCAGCGTCTGGTGAAGAGAGGCGTCCACACGCTCAGGAAGCCACAGTATCAGCT
GTGTTATGTGGATCCTGGAATTGCTAGTTCAGAAGAGGTGGAGCGACTGAAGACTATTGA
TGGCACACTAGTCAGGTTTTAGGTTCCTGGTAAGTACGGAAACTAAACCTGACTTCCTTT
ATCTAATTATTGGGTTTCATTCCACCGTCTTGTTGACGCCTTCATCAGTTACTTTGACCT
AACAAGACATGCTTGGTTGACTCGTCGAGATGCTAAGTGAAGCTTGCTGCTTTTCAACAA
TATTTGAAAATCTGCGTGGTGGTATTCTGGAGGGATAGGTCAAACTGCCTTGAATAGATC
TTGACATGCCCACTTGGGCACTTGTCCTAAACTGAAATTTACACCGCGTTTTCGTTTTTT
TACCAGGTTGTAGTCTGCGGGATCTTGATGGTGGTTGTGGCAGTCGGCAATTTTGCCAAC
ACTATGTATACACTGGTGGTACTGAAGCTGAGGTTTAAAGCAAAGATGAAGAGAGCAAAG
GGCAGACAGGATCCCCCACATCAAAACTGACAGGCATGATCGTTCCTGGAACACAAGGAT
GCAGCAGCTGCTGGCACCATCTCTTCTGTAAATCCTTTGACCTGTGTCAACATTTTTTGG
TGCTGCCGTGCTAGTAGTAGGAGTATCTTGCAAGCTTTTGTTTTGGATGGTGTGGTGGTC
CAGAAAACACTCTGTCTGCTAAATTACCAGAAACATCCGCAGTTGTATATTGCG