Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d054067_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:245806161:245807669:-1 gene:Zm00001d054067 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroperoxide lyase1 description:Probable inactive linolenate hydroperoxide lyase
Sequence	ATGCTGCCGTCCTTCGTGTCGCCGACGGCGAGCGCCGCGGCCTCGGTGACGCCTCCGCCG CGGCCGATACCAGGCAGCTACGGGCCACCGGTGCTGGGCCCGCTACGGGACCGGCTCGAC TACTTCTGGTTCCAGAGCCAGGACGAGTTCTTCCGGAAGCGCGCGGCGGCACACCGCAGC ACCGTGTTCCGCACCAACATCCCGCCCACCTTCCCCTTCTTCGTGGGCGTGGACCCGCGC GTGGTCGCCATCGTGGACGCCGCCGCCTTCACCGCGCTCTTCGACCCGGACCTCGTGGAC AAGCGCGACATCCTCATCGGGCCCTACAACCCGGGCGCCGGCTTCACCGGCGGGACGCGC GTCGGCGTGTACCTCGACACGCAGGAGGAGGAGCACGCGCGCGTCAAGACCTTCGCCATG GACCTCCTCCACCGCTCCGCCCGCACCTGGTCCGCCGACTTCCGCGCGAGCGTCGGCGCC ATGCTGGACGCCGTGGACGCGGAGTTCGGCAAGGACGACGGCAGCGACAAGAAGCCCTCC GCCAGCTACCTCGTCCCCCTGCAGCAGTGCATCTTCCGGTTCCTCTGCAAGGCGTTCGTG GGCGCCGACCCGTCCGCCGACTGGCTGGTGGACAACTTCGGCTTCACCATCCTGGACATC TGGCTGGCGCTGCAGATCCTGCCCACGCAGAAGATCGGCCTCGTCCAGCCGCTGGAGGAG CTGCTCATCCACTCGTTCCCGCTGCCCTCCTTCCTCATCTGGCCGGGCTACTACGTGCTG TACCGCTTCATCGAGAAGCACGGCGCCGAGGCCGTGGCCTACGCCGAGGCGCAGCACGGC ATCGGCAAGAAGGACGCCATCAACAACATGCTGTTCGTGCTCGGCTTCAACGCCTTCGGC GGCTTCTCCGTGTTCCTGCCCTTCCTCGTGGCCAAGGTCGGCGGCGCCCCGGCGCTGCGC GAGCGGCTGCGGGACGAGGTGCGGCGCGCCATGGTGGGCAAAGACGGCGAGTTCGGGTTC GCCACCGTCCGCGAGGACATGCCGCTGGTGCGGTCGACGGTGTACGAGATGCTGCGGATG CAGCCGCCCGTGCCGCTGCAGTTCGGGCGCGCGCGCAGGGACTTCGTGCTGCGCTCCCAC GGCGGCGCCGCGTACCAGGTGTCCGCGGGCGAGGTGCTGTGCGGGTACCAGCCGCTGGCG ATGCGGGACCCCGAGGTGTTCGAGCGGCCCGAGGAGTTCGTGCCGGAACGCTTCCTCGGC GACGAGGGCGCCAGGCTGCTGCAGCACCTCTTCTGGTCCAACGGGCCGGAGACGGCGCAG CCCGGGCCCGGGAACAAGCAGTGCGCCGCCAAGGAGGTGGTGGTGGACACGGCGTGCATG CTGCTGGCCGAGCTGTTCCGGCGCTACGACGACTTCGAGGTGGAGGGCACCTCCTTCACC AAGCTCGTCAAGCGCCAGGCGTCGCCGAGCGTGGCGCAGGCAGCAGCAGCCGCCGGAGCG CAGCAGTGA

Peptide Sequence

PEP ID	Zm00001d054067_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:245806161:245807669:-1 gene:Zm00001d054067 transcript:Zm00001d054067_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroperoxide lyase1 description:Probable inactive linolenate hydroperoxide lyase
Sequence	MLPSFVSPTASAAASVTPPPRPIPGSYGPPVLGPLRDRLDYFWFQSQDEFFRKRAAAHRS TVFRTNIPPTFPFFVGVDPRVVAIVDAAAFTALFDPDLVDKRDILIGPYNPGAGFTGGTR VGVYLDTQEEEHARVKTFAMDLLHRSARTWSADFRASVGAMLDAVDAEFGKDDGSDKKPS ASYLVPLQQCIFRFLCKAFVGADPSADWLVDNFGFTILDIWLALQILPTQKIGLVQPLEE LLIHSFPLPSFLIWPGYYVLYRFIEKHGAEAVAYAEAQHGIGKKDAINNMLFVLGFNAFG GFSVFLPFLVAKVGGAPALRERLRDEVRRAMVGKDGEFGFATVREDMPLVRSTVYEMLRM QPPVPLQFGRARRDFVLRSHGGAAYQVSAGEVLCGYQPLAMRDPEVFERPEEFVPERFLG DEGARLLQHLFWSNGPETAQPGPGNKQCAAKEVVVDTACMLLAELFRRYDDFEVEGTSFT KLVKRQASPSVAQAAAAAGAQQ

Transcript Sequence

Transcript ID	Zm00001d054067_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:245806161:245807669:-1 gene:Zm00001d054067 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroperoxide lyase1 description:Probable inactive linolenate hydroperoxide lyase
Sequence	ATGCTGCCGTCCTTCGTGTCGCCGACGGCGAGCGCCGCGGCCTCGGTGACGCCTCCGCCG CGGCCGATACCAGGCAGCTACGGGCCACCGGTGCTGGGCCCGCTACGGGACCGGCTCGAC TACTTCTGGTTCCAGAGCCAGGACGAGTTCTTCCGGAAGCGCGCGGCGGCACACCGCAGC ACCGTGTTCCGCACCAACATCCCGCCCACCTTCCCCTTCTTCGTGGGCGTGGACCCGCGC GTGGTCGCCATCGTGGACGCCGCCGCCTTCACCGCGCTCTTCGACCCGGACCTCGTGGAC AAGCGCGACATCCTCATCGGGCCCTACAACCCGGGCGCCGGCTTCACCGGCGGGACGCGC GTCGGCGTGTACCTCGACACGCAGGAGGAGGAGCACGCGCGCGTCAAGACCTTCGCCATG GACCTCCTCCACCGCTCCGCCCGCACCTGGTCCGCCGACTTCCGCGCGAGCGTCGGCGCC ATGCTGGACGCCGTGGACGCGGAGTTCGGCAAGGACGACGGCAGCGACAAGAAGCCCTCC GCCAGCTACCTCGTCCCCCTGCAGCAGTGCATCTTCCGGTTCCTCTGCAAGGCGTTCGTG GGCGCCGACCCGTCCGCCGACTGGCTGGTGGACAACTTCGGCTTCACCATCCTGGACATC TGGCTGGCGCTGCAGATCCTGCCCACGCAGAAGATCGGCCTCGTCCAGCCGCTGGAGGAG CTGCTCATCCACTCGTTCCCGCTGCCCTCCTTCCTCATCTGGCCGGGCTACTACGTGCTG TACCGCTTCATCGAGAAGCACGGCGCCGAGGCCGTGGCCTACGCCGAGGCGCAGCACGGC ATCGGCAAGAAGGACGCCATCAACAACATGCTGTTCGTGCTCGGCTTCAACGCCTTCGGC GGCTTCTCCGTGTTCCTGCCCTTCCTCGTGGCCAAGGTCGGCGGCGCCCCGGCGCTGCGC GAGCGGCTGCGGGACGAGGTGCGGCGCGCCATGGTGGGCAAAGACGGCGAGTTCGGGTTC GCCACCGTCCGCGAGGACATGCCGCTGGTGCGGTCGACGGTGTACGAGATGCTGCGGATG CAGCCGCCCGTGCCGCTGCAGTTCGGGCGCGCGCGCAGGGACTTCGTGCTGCGCTCCCAC GGCGGCGCCGCGTACCAGGTGTCCGCGGGCGAGGTGCTGTGCGGGTACCAGCCGCTGGCG ATGCGGGACCCCGAGGTGTTCGAGCGGCCCGAGGAGTTCGTGCCGGAACGCTTCCTCGGC GACGAGGGCGCCAGGCTGCTGCAGCACCTCTTCTGGTCCAACGGGCCGGAGACGGCGCAG CCCGGGCCCGGGAACAAGCAGTGCGCCGCCAAGGAGGTGGTGGTGGACACGGCGTGCATG CTGCTGGCCGAGCTGTTCCGGCGCTACGACGACTTCGAGGTGGAGGGCACCTCCTTCACC AAGCTCGTCAAGCGCCAGGCGTCGCCGAGCGTGGCGCAGGCAGCAGCAGCCGCCGGAGCG CAGCAGTGA