Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d054043_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:4:245469410:245473221:1 gene:Zm00001d054043 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Binding protein homolog2 description: Binding protein homolog2
Sequence	ATGGATCGGGTTCGTGGATCCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTC GCGTTTTCAGTTGCTAAGGAGGAGACCAAGAAGCTCGGCACCGTGATCGGTATCGATCTC GGAACCACCTACTCCTGTGTGGGTGTGTACAAGAACGGACATGTCGAGATCATCGCCAAT GACCAGGGTAACCGTATCACACCCTCATGGGTTGCCTTCACCGATAGCGAGAGGCTCATC GGTGAGGCTGCCAAGAACCAGGCAGCTGTCAACCCTGAGAGGACCATCTTTGACGTCAAG CGTCTCATCGGAAGAAAGTTTCAGGATAAGGAAGTCCAGAGGGACATGAAACTTGTCCCC TACAAGATTATTAACAAGGATGGCAAGCCATACATTCAGGTCAAGATCAAGGATGGGGAG AACAAGGTCTTCAGCCCTGAGGAGATCAGTGCCATGATTCTTGGCAAGATGAAGGATACT GCTGAGGCGTACCTTGGCAAGAAGATCAACGATGCTGTCGTCACTGTCCCTGCATACTTC AATGATGCGCAGAGGCAGGCAACCAAGGATGCTGGTGTCATTGCCGGCCTCAATGTTGCT AGGATCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGTTTGGACAAGAAGGGTGGC GAGAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACC ATTGATAACGGTGTGTTTGAGGTGCTGGCCACCAATGGTGACACCCATCTTGGAGGTGAG GATTTTGACCAGAGGATCATGGAATACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAG GACATCGGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGAGGGAAGCTGAGCGTGCCAAG AGAGCCCTTAGCAACCAGCACCAGGTCCGAGTTGAGATCGAGTCCCTCTTTGACGGGACC GACTTCTCGGAGCCGCTGACCCGTGCCAGGTTTGAGGAGCTGAACAACGATCTGTTCCGC AAGACTATGGGCCCTGTCAAGAAGGCCATGGAGGACGCTGGCCTTGAGAAGAGCCAGATC CACGAGATCGTCCTGGTTGGTGGAAGCACCAGGATTCCCAAGGTCCAGCAGCTCCTGAAG GACTACTTCAATGGCAAGGAGCCCAACAAGGGTGTGAACCCTGATGAGGCTGTTGCCTTT GGTGCCGCGGTGCAGGGAAGCATCTTGAGCGGCGAGGGTGGTGACGAGACAAAAGATATC CTCCTCCTTGATGTGGCTCCTCTCACCCTGGGTATTGAGACCGTCGGTGGAGTCATGACC AAGTTGATCCCGAGGAACACTGTCATCCCGACCAAGAAGTCGCAGGTGTTCACCACCTAC CAGGACCAGCAGACCACTGTCTCCATCCAGGTCTTTGAGGGTGAGCGCAGCATGACCAAG GACTGCCGTCTTCTGGGCAAGTTCGACCTCAATGGCATTCCGTCAGCTCCGAGGGGCACA CCCCAGATCGAGGTGACCTTCGAGGTGGACGCCAACGGTATCCTGAACGTGAAGGCGGAG GACAAGGGCACGGGCAAGTCGGAGAAGATCACGATCACGAACGAGAAGGGGCGGCTGAGC CAGGAGGAGATCGACCGCATGGTGCGGGAGGCGGAGGAGTTCGCGGAGGAGGACAAGAAG GTGAAGGAGCGGATCGACGCCCGCAACCAGCTGGAGACGTACGTGTACAACATGAAGAAC ACGGTGGGCGACAAGGACAAGCTCGCGGACAAGCTGGAGGCGGAGGAGAAGGAGAAGGTG GAGGAGGCCCTCAAGGAGGCGCTCGAGTGGCTGGACGACAACCAGTCCGCCGAGAAGGAG GACTACGAGGAGAAGCTCAAGGAGGTGGAGGCCGTGTGCAACCCCATCGTGTCGGCCGTA TACCAGCGGTCGGGCGGCGCCCCCGGTGGTGATGCCGACGGCGGCGTCGACGACGACCAC GACGAGCTGTAG

Peptide Sequence

PEP ID	Zm00001d054043_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:4:245469410:245473221:1 gene:Zm00001d054043 transcript:Zm00001d054043_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Binding protein homolog2 description: Binding protein homolog2
Sequence	MDRVRGSAFLLGVLLAGSLFAFSVAKEETKKLGTVIGIDLGTTYSCVGVYKNGHVEIIAN DQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVP YKIINKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYF NDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT IDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDIGKDNRALGKLRREAERAK RALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQI HEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDI LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTK DCRLLGKFDLNGIPSAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLS QEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKV EEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDH DEL

Transcript Sequence

Transcript ID	Zm00001d054043_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:245469410:245473221:1 gene:Zm00001d054043 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Binding protein homolog2 description: Binding protein homolog2
Sequence	GACTCGTCAGCAAGCAGTTCGAAACAAGGATCGATCCAGGAGCTTCCAGAAGGCGAGGAG GAAGAGGGAGAAGGGCGCGCGCGCGCGCAGCGTTCAAGTGGTGCTGGTGTCGGCCATGGA TCGGGTTCGTGGATCCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTCGCGTT TTCAGTTGCTAAGGAGGAGACCAAGAAGCTCGGCACCGTGATCGGTATCGATCTCGGAAC CACCTACTCCTGTGTGGGTGTGTACAAGAACGGACATGTCGAGATCATCGCCAATGACCA GGGTAACCGTATCACACCCTCATGGGTTGCCTTCACCGATAGCGAGAGGCTCATCGGTGA GGCTGCCAAGAACCAGGCAGCTGTCAACCCTGAGAGGACCATCTTTGACGTCAAGCGTCT CATCGGAAGAAAGTTTCAGGATAAGGAAGTCCAGAGGGACATGAAACTTGTCCCCTACAA GATTATTAACAAGGATGGCAAGCCATACATTCAGGTCAAGATCAAGGATGGGGAGAACAA GGTCTTCAGCCCTGAGGAGATCAGTGCCATGATTCTTGGCAAGATGAAGGATACTGCTGA GGCGTACCTTGGCAAGAAGATCAACGATGCTGTCGTCACTGTCCCTGCATACTTCAATGA TGCGCAGAGGCAGGCAACCAAGGATGCTGGTGTCATTGCCGGCCTCAATGTTGCTAGGAT CATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGTTTGGACAAGAAGGGTGGCGAGAA GAACATCCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACCATTGA TAACGGTGTGTTTGAGGTGCTGGCCACCAATGGTGACACCCATCTTGGAGGTGAGGATTT TGACCAGAGGATCATGGAATACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAGGACAT CGGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGAGGGAAGCTGAGCGTGCCAAGAGAGC CCTTAGCAACCAGCACCAGGTCCGAGTTGAGATCGAGTCCCTCTTTGACGGGACCGACTT CTCGGAGCCGCTGACCCGTGCCAGGTTTGAGGAGCTGAACAACGATCTGTTCCGCAAGAC TATGGGCCCTGTCAAGAAGGCCATGGAGGACGCTGGCCTTGAGAAGAGCCAGATCCACGA GATCGTCCTGGTTGGTGGAAGCACCAGGATTCCCAAGGTCCAGCAGCTCCTGAAGGACTA CTTCAATGGCAAGGAGCCCAACAAGGGTGTGAACCCTGATGAGGCTGTTGCCTTTGGTGC CGCGGTGCAGGGAAGCATCTTGAGCGGCGAGGGTGGTGACGAGACAAAAGATATCCTCCT CCTTGATGTGGCTCCTCTCACCCTGGGTATTGAGACCGTCGGTGGAGTCATGACCAAGTT GATCCCGAGGAACACTGTCATCCCGACCAAGAAGTCGCAGGTGTTCACCACCTACCAGGA CCAGCAGACCACTGTCTCCATCCAGGTCTTTGAGGGTGAGCGCAGCATGACCAAGGACTG CCGTCTTCTGGGCAAGTTCGACCTCAATGGCATTCCGTCAGCTCCGAGGGGCACACCCCA GATCGAGGTGACCTTCGAGGTGGACGCCAACGGTATCCTGAACGTGAAGGCGGAGGACAA GGGCACGGGCAAGTCGGAGAAGATCACGATCACGAACGAGAAGGGGCGGCTGAGCCAGGA GGAGATCGACCGCATGGTGCGGGAGGCGGAGGAGTTCGCGGAGGAGGACAAGAAGGTGAA GGAGCGGATCGACGCCCGCAACCAGCTGGAGACGTACGTGTACAACATGAAGAACACGGT GGGCGACAAGGACAAGCTCGCGGACAAGCTGGAGGCGGAGGAGAAGGAGAAGGTGGAGGA GGCCCTCAAGGAGGCGCTCGAGTGGCTGGACGACAACCAGTCCGCCGAGAAGGAGGACTA CGAGGAGAAGCTCAAGGAGGTGGAGGCCGTGTGCAACCCCATCGTGTCGGCCGTATACCA GCGGTCGGGCGGCGCCCCCGGTGGTGATGCCGACGGCGGCGTCGACGACGACCACGACGA GCTGTAGATGGTGGTGGGGAGCGGTGACGTGGAGTGCCGGGAACCAAGCCAAATTTTGTA ATGGTGTTTAGGGGGGAGGGTGGTGGACAAAAAAACTAATCTTGGTGCTGCTCTGCCAAT AGACGGGCTGAGCATAGAACTTTTTTTCCCTTCTACTTCCTTGTGATTGTTCTTTTTATA GAGGATTCGCATTGCAGTGTAATGTAAAAAAAAGAAGACGCGCTTCTGAAACTTGTTACT ACAAGTTAATAATGAAATGGTGCATTGCATCACAGTGTAATGATTGATATGAGTACAGGA CGGGAAAGCCCAAAGCCGAGCAGTGCAATCTGCTTGGGACTTGGATTACATTATT