Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d054013_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:245162166:245166098:1 gene:Zm00001d054013 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I subunit 43
Sequence	ATGCCGAAGAAGGGGACTAAATCTAAGAAGGAGAAGGTGGACGATGTGCCCAATGAACAA GAAAATAAGCTTCCAGACTACCTGGAGCTCCAGCGCACACGTGTCGTCTGCAATGCTGAT GCCCCCATTCATACTCAAGGTTTCCAATACTCGGGTGCATTTGCTGCTATGGGAATTGAT AATAGCGTGTCAGTGGATAAATTTTGCAAGAATTTCAAAATTGAAATAAATCGTCTCACT GAAGATTATATGGAGTTCGATATGATTGGTATTGATGCATCAATAGCCAATGCTTTCCGG AGAATCCTCATTTCAGAGGTTCCAACTATGGCAATTGAGAAAGTCTTCATGGCTGACAAC AACTCAGTTATAGCAGATGAGGTTCTTTCACATAGACTAGGACTTATTCCACTTGATGCA GATCCAAGACTCTTTGAATATATCTCAGAAAACGATGTCCCAAATGAAAGGAATACTATT GTTTATAAACTGCACGTTTCTTGTCCAAAGAATTCTCAACGAATTACAGTGAAATCTAGT GAACTAGAGTGGTTACCAGAAGGTAGCCAATTAAGCATGTCAGCCCCTGCACAGTCTGGA GACAAACAGAAGACTTTCACTTCCTTCAGTCAAAGCCAAAAGGAGATCTTAGAAAAGCCT CTTGGTGTGAAGTATAAAGATATTACTATTGCCAGGCTTGGGCCAGGACAGGCTATCGAG CTCGAGGCACATGCTGTTAAGGGAACTGGGAACGTTCACGCCAAGTGGTCTCCAGTTGCT ACAGCCTGGTACAGAATGCTCCCTGAGGTTGTTATTCTTAAAGAAGTTGAAGGCCCTCAG GCAGAGGAGCTGGTGAATAAGTGCCGGGTTAATGTTTTTGACATCGAAGACCTGGCTAAC GGTGGAAAGAGGGCTGTTGTTGCGAGGCCAAGGGCATGCACGCTCTGCAGAGAATGTGTG ATGGGACCAAATGAGAAACAAGTGGAGCTACGGCGTGTCAGAGACCATTTCATATTCACC ATCGAGTCCACCGGAAGCATGCCCCCGGAGGTGCTGTTCACAGAAGCCGTGAAGATTTTG GAAGAGAAGTGCGCGAGGGTCATATCTGAGCTATCCTGA

Peptide Sequence

PEP ID	Zm00001d054013_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:245162166:245166098:1 gene:Zm00001d054013 transcript:Zm00001d054013_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I subunit 43
Sequence	MPKKGTKSKKEKVDDVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGID NSVSVDKFCKNFKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADN NSVIADEVLSHRLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSS ELEWLPEGSQLSMSAPAQSGDKQKTFTSFSQSQKEILEKPLGVKYKDITIARLGPGQAIE LEAHAVKGTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLAN GGKRAVVARPRACTLCRECVMGPNEKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKIL EEKCARVISELS

Transcript Sequence

Transcript ID	Zm00001d054013_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:245162166:245166098:1 gene:Zm00001d054013 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I subunit 43
Sequence	GCACACAGCCGCCACCGTTTCTTCATCTCCCAGCATCTTCTTCCTCGCAGACTCGCAGTG CCGGCGCTCCATCTTCCGCTCCCTCCCTTACACGTGCTCGGCACGCAGGCGACGGCGGCT ACGTTCGGGCTCGGGCTCTCAGCAACCGCGTCAGCAGCTGCCCCTCCCGCTTCTCGCCAG TCGCACCGTGCCCTCGCCTCCGGTCCTCAGCACACCAGCCGTGACCCTGCGTCATAACAG CGGTACAAGGGTGAACAAAGAACATCGAGAGGAAGACAATATGCCGAAGAAGGGGACTAA ATCTAAGAAGGAGAAGGTGGACGATGTGCCCAATGAACAAGAAAATAAGCTTCCAGACTA CCTGGAGCTCCAGCGCACACGTGTCGTCTGCAATGCTGATGCCCCCATTCATACTCAAGG TTTCCAATACTCGGGTGCATTTGCTGCTATGGGAATTGATAATAGCGTGTCAGTGGATAA ATTTTGCAAGAATTTCAAAATTGAAATAAATCGTCTCACTGAAGATTATATGGAGTTCGA TATGATTGGTATTGATGCATCAATAGCCAATGCTTTCCGGAGAATCCTCATTTCAGAGGT TCCAACTATGGCAATTGAGAAAGTCTTCATGGCTGACAACAACTCAGTTATAGCAGATGA GGTTCTTTCACATAGACTAGGACTTATTCCACTTGATGCAGATCCAAGACTCTTTGAATA TATCTCAGAAAACGATGTCCCAAATGAAAGGAATACTATTGTTTATAAACTGCACGTTTC TTGTCCAAAGAATTCTCAACGAATTACAGTGAAATCTAGTGAACTAGAGTGGTTACCAGA AGGTAGCCAATTAAGCATGTCAGCCCCTGCACAGTCTGGAGACAAACAGAAGACTTTCAC TTCCTTCAGTCAAAGCCAAAAGGAGATCTTAGAAAAGCCTCTTGGTGTGAAGTATAAAGA TATTACTATTGCCAGGCTTGGGCCAGGACAGGCTATCGAGCTCGAGGCACATGCTGTTAA GGGAACTGGGAACGTTCACGCCAAGTGGTCTCCAGTTGCTACAGCCTGGTACAGAATGCT CCCTGAGGTTGTTATTCTTAAAGAAGTTGAAGGCCCTCAGGCAGAGGAGCTGGTGAATAA GTGCCGGGTTAATGTTTTTGACATCGAAGACCTGGCTAACGGTGGAAAGAGGGCTGTTGT TGCGAGGCCAAGGGCATGCACGCTCTGCAGAGAATGTGTGATGGGACCAAATGAGAAACA AGTGGAGCTACGGCGTGTCAGAGACCATTTCATATTCACCATCGAGTCCACCGGAAGCAT GCCCCCGGAGGTGCTGTTCACAGAAGCCGTGAAGATTTTGGAAGAGAAGTGCGCGAGGGT CATATCTGAGCTATCCTGAGAGGCCGGCGGCACTGTGCAGCACTGGAGTTAGAGTAAACC AGCTCAGGCTGCAGTATCTGCTGTTTTTGATGGAGACTAGTGTGCGCCATTAAACATTTT TTTTGTGGTGTTGGATATTTGGGTCAGCAAATGTAAGCTGTTTATATCATGTAACGCAGT GTAATGTTAGATTAAACTGTGGCAGGTGATCGAAATGGCAGCTGTATCAAAGGTAGACGT CGGCTGTTAGTCCGCAAGCACTGTATTTTTGCGTTTAGGTAGGTGACTCGGCCCAGGTTA CATGGAAAATGAATTATTTTTTTCTTGAGAAAAATGAAAATTGCTT