Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d054003_T050
CDS Infomation	cds chromosome:B73_RefGen_v4:4:244915729:244921584:-1 gene:Zm00001d054003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	ATGAATGTGGGACATGCTGCCCACCTGTCCGGGCAGACAGCGCACATGAATCAAGTTCCT GGCTCCGGTGTTGGCATTGGTGTTGGCGGCTCAGACGGGCTACCGCAGCACCAGCCAATG CAGGAGATGGCGGCGCTCTCAGGAATGGACCAGCAGTTTGTCATGCTTCGGACCGCTATG CGCGACAAGATATCTGACTATATAGGAAGAAAACAGTCACCGGGTGATTGGCGGAAACGG TTGCCTGAACTGGCAAAACGGCTTGAGGAGATCTTGTACAGAAAATTCCCAAACAAGCAT GAGTACTACAATATGATGAAGGGACCAGTTGAGCCACAATTGCAATTTGCTATCAAGACC TTGAGTGCTCAGAACCAACACAATCAACAAAACCCACAAATGACAAGGCAAATATCATCG TCCTCTAGCTATGGTGCTATGATTCCTACCCCTGGTATGACGCAAGGCACCAGTGCAGGT TCTAGGACTCCTTATGTCACGGAGACCAATGCTCTTTCATCGTCTGGTGCATGCATGGTT CCTCAGAATGCTAACATGGGTACCTCAATGCAAGGTCCAATGTCTAACGGGTACCAGCAT TTAAATACCAACATTTCACAAAATTCTACCACAAATAATGTCGAATCTACAATGGGTTCA GTTGGCGTTCAGCGACAACTATCTCATATGATCCCAACTCCAGGATTCAGTAATCAACAG AATGTACCTTCAAATCCTGACTATTCAAATGGAACTGGATACTTCAACGGTGAGTCAGCT GTGGCGCCACATATGCAGCACCAGAAACAATTTCCTAGCAACCACAATAGCAATCAAATT CAACATATTGGGGGACACAATAATTCTGGGATACATTCAAGCTTGCTGGACAACTCATCT GCCTATGGTTTATCAGATGGCCACATGAATGGTGGCATAGGAGTGCATGGGTCAAATATG CAGCTAACAAACAGGACTACTGCCCCAGAAGCATATATGAACATATCCTCTTATGGCAAT TCGCCCAAACCTATGCAGCAGCAATTCAATCAGCACCCTCAGCAGAGAATACCGACATCA GTTGATATGGCTGGTTCCGGCAGCTTTTATGCTATTGGCTCTACCCCTTTAACCACAGCA AATAGTCAGAGCATGAATGTTGCAAATTTACAATCTAGATCAAGCATGAATCAGATGTTG GTTTCCAATCAGCTAAACATTCAGTCCGTCCAGCAACAGTCCCAGATAAAAAATGGGCCT TTGGATCAAACAGAGAAGGTGAATTTTCAGTCAACACAGCTGACTCATGATCAACTACTA CACCAGCACCCAATGTCGCAGCATCAGGTGCAACCTAATTCCCAGTTTATTCAAAATCAG TATCATATAAATCAGCAGCAGCCAAATTCACAGCATCAGCAGGCTATGTTAAGGAACAAT TCCCTTAAACAGTCTCAAATGGCTTCCAACCATTCAATGCAACTGCCAGAACAGGGGACT CTGCCACACACTGAACTAGTTTCTTCACAAGCTAGTGATCCTGCTGACCTTCCAAACTTC CAGGGTCAATACCAGCAAAGAAATGCTCTTGACAATGTTAAAGGAGGGCAGATGCTTGGT CATCTATCTAGCTCTCAAAATTTTCTTCCTTCTGCCTCACATGGTTCTCAGCAATTGTTG CCCTCTAATCCGCAGCTTGATAACGGTTCAAATGCTGTAAGTTATGTGCTGAAAGGATCA CAGACAGAGCAAATGCTGCTTTCTCAATGGCAGCCACAAACAATGGAAAAGGCTCCTGTC GCTACTAATTCATCACTCGAAAAACAAGTACAAGAAGATTGTTGTCAAAGAATAATGTCA CAAGATGGAGTACAGCAACCATTTTCATCAGATTGGTGTCTTTCTAATGGCACTCTCGCT TCTGTTGATCCTGCAGTGCCAAAACCCACAGCTGGAGGGTTTGGGCAGGTCAAGAGAAAT ATTCATTACCTCCGTCAGATAAAGTGGTTGCTGTTGCTGTTTCATGCAAAAACATGCACA TACCCTGTTGGAAGTTGTAAGTTCAATGGTTGTGTTCAGGTGCAGGAGCTTTTGAACCAT TTTCAGAATTGTCAAAGGAAAGATTGTTCGTACAGGAGTTGCACTAAGTCAAAAGCAATG TCTCACCATTATAAAACTTGTGTCGATGAGCAATGTCCTGTGTGCAGCGTTGTAAGGAAG TTTTTGCGCCAATCAACTGAACAGGCATCTAAGCAAAAAACTCTTGAGTCTAGAAAACTT GCTCAACAAAATGTGCCTCAGAGAATCATGAACGGGATAGAAGGTGATAGAATGGATGTT GATCCAATGTCAGCTGAAGCGTTCGAGGATCAACCATCTGTTCCAAAACGTTTAAAGATG CATCTTCCATCACTCAGTGGCCCAGAAAATGATATCTCTGTAGTCTCCAATCATCATGTA AACCCAGGCTTTCTATTGCAGGAAGCACAGCCTGAGCAGCTTGAGCACAATAATAGGACA ACATATCTGAAACGAGAGGTAGATGCAAAGGCTGACATTCGGGCTCCTCAAAAGCCCATA AAAATAAGTTATGACATTGATGAAAATGTGACTACATCAAGGCATAATGTGATTCCTGGT GTTCCCAGTGAGATGGACTCTCATATCAAGCAAGAAAACTTGTCAGTTAACAAAGAGACA AGTGAAACTGCCCTTGAGGTTAAAAATGAAACAAATGATCTAACTGATGCGACTGTGACT AAATCAGGAAAACCAAAAATAAAAGGTGTTTCTATGATTGAATTGTTCTATCCAGATGAA GTAGATGTACATATTGACAGTCTAAAGCTGTGGGTTGGTCAGAGTAAGGCTAAAGCTGAA AAGAATCAAGCTATTGGTCATTCTGAGAATGAGAACTCTTGCCAGCTCTGTAGAGTAGAG AAACTTACTTTTGAACCTCCACCAATGTATTGTTCTCCTTGTGGAGCTCGGATAAAGCGA AACGCACCATACTACGCTGTAGGTACTGGTGATACACGCCACTATTTATGTATCCCTTGC TACAACGAGTCTCGTGGTGAGACTATTGAGGTTGAAGGTCAAACATTTCCGAAGGCAAAG

Peptide Sequence

PEP ID	Zm00001d054003_P050
PEP Infomation	pep chromosome:B73_RefGen_v4:4:244915729:244921584:-1 gene:Zm00001d054003 transcript:Zm00001d054003_T050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	MNVGHAAHLSGQTAHMNQVPGSGVGIGVGGSDGLPQHQPMQEMAALSGMDQQFVMLRTAM RDKISDYIGRKQSPGDWRKRLPELAKRLEEILYRKFPNKHEYYNMMKGPVEPQLQFAIKT LSAQNQHNQQNPQMTRQISSSSSYGAMIPTPGMTQGTSAGSRTPYVTETNALSSSGACMV PQNANMGTSMQGPMSNGYQHLNTNISQNSTTNNVESTMGSVGVQRQLSHMIPTPGFSNQQ NVPSNPDYSNGTGYFNGESAVAPHMQHQKQFPSNHNSNQIQHIGGHNNSGIHSSLLDNSS AYGLSDGHMNGGIGVHGSNMQLTNRTTAPEAYMNISSYGNSPKPMQQQFNQHPQQRIPTS VDMAGSGSFYAIGSTPLTTANSQSMNVANLQSRSSMNQMLVSNQLNIQSVQQQSQIKNGP LDQTEKVNFQSTQLTHDQLLHQHPMSQHQVQPNSQFIQNQYHINQQQPNSQHQQAMLRNN SLKQSQMASNHSMQLPEQGTLPHTELVSSQASDPADLPNFQGQYQQRNALDNVKGGQMLG HLSSSQNFLPSASHGSQQLLPSNPQLDNGSNAVSYVLKGSQTEQMLLSQWQPQTMEKAPV ATNSSLEKQVQEDCCQRIMSQDGVQQPFSSDWCLSNGTLASVDPAVPKPTAGGFGQVKRN IHYLRQIKWLLLLFHAKTCTYPVGSCKFNGCVQVQELLNHFQNCQRKDCSYRSCTKSKAM SHHYKTCVDEQCPVCSVVRKFLRQSTEQASKQKTLESRKLAQQNVPQRIMNGIEGDRMDV DPMSAEAFEDQPSVPKRLKMHLPSLSGPENDISVVSNHHVNPGFLLQEAQPEQLEHNNRT TYLKREVDAKADIRAPQKPIKISYDIDENVTTSRHNVIPGVPSEMDSHIKQENLSVNKET SETALEVKNETNDLTDATVTKSGKPKIKGVSMIELFYPDEVDVHIDSLKLWVGQSKAKAE KNQAIGHSENENSCQLCRVEKLTFEPPPMYCSPCGARIKRNAPYYAVGTGDTRHYLCIPC YNESRGETIEVEGQTFPKAK

Transcript Sequence

Transcript ID	Zm00001d054003_T050
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:244915729:244921584:-1 gene:Zm00001d054003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	CGCCCCGACAAATTCCCCCATTCCCAAATCGCCCGCGAACTCCCCGCCGCCCGCCCCGCA TCATCGACCTGGTCCCGCCGCCGCCGCCGCCGCTCGCCGCCGTACGGAATCTCAGGTACC CCGTCGCCGCGCCCGCGCCCGCCACCCTCCTGGCGTGGTCCTGCCGGGCTTCTAGGGTTT CGGGCGGGCCGACCCTAGGGGGTCTGCAATTCGCGGGCCGGGCTCCACGCCCCGCGGCTC CCCCCCGCGCCTCGGTCGCCGATCGCCGCCATCTGCCCCCGCGCGGCCCTGGGCGGAGCT TCCACACGCTGGCCTGCCTACTACATGCGGCAGCTGCCACACTGCTGCTCCTGCTCGATC GGGACTCGCCCCGCCTCGGATTCCGCGCAGGATAGACCGTTTCCTACTACCGCGCTGCCG CACGTGGGATGACCTGACCCTCCGCCTGCCCCCAAGATGAATGTGGGACATGCTGCCCAC CTGTCCGGGCAGACAGCGCACATGAATCAAGTTCCTGGCTCCGGTGTTGGCATTGGTGTT GGCGGCTCAGACGGGCTACCGCAGCACCAGCCAATGCAGGAGATGGCGGCGCTCTCAGGA ATGGACCAGCAGTTTGTCATGCTTCGGACCGCTATGCGCGACAAGATATCTGACTATATA GGAAGAAAACAGTCACCGGGTGATTGGCGGAAACGGTTGCCTGAACTGGCAAAACGGCTT GAGGAGATCTTGTACAGAAAATTCCCAAACAAGCATGAGTACTACAATATGATGAAGGGA CCAGTTGAGCCACAATTGCAATTTGCTATCAAGACCTTGAGTGCTCAGAACCAACACAAT CAACAAAACCCACAAATGACAAGGCAAATATCATCGTCCTCTAGCTATGGTGCTATGATT CCTACCCCTGGTATGACGCAAGGCACCAGTGCAGGTTCTAGGACTCCTTATGTCACGGAG ACCAATGCTCTTTCATCGTCTGGTGCATGCATGGTTCCTCAGAATGCTAACATGGGTACC TCAATGCAAGGTCCAATGTCTAACGGGTACCAGCATTTAAATACCAACATTTCACAAAAT TCTACCACAAATAATGTCGAATCTACAATGGGTTCAGTTGGCGTTCAGCGACAACTATCT CATATGATCCCAACTCCAGGATTCAGTAATCAACAGAATGTACCTTCAAATCCTGACTAT TCAAATGGAACTGGATACTTCAACGGTGAGTCAGCTGTGGCGCCACATATGCAGCACCAG AAACAATTTCCTAGCAACCACAATAGCAATCAAATTCAACATATTGGGGGACACAATAAT TCTGGGATACATTCAAGCTTGCTGGACAACTCATCTGCCTATGGTTTATCAGATGGCCAC ATGAATGGTGGCATAGGAGTGCATGGGTCAAATATGCAGCTAACAAACAGGACTACTGCC CCAGAAGCATATATGAACATATCCTCTTATGGCAATTCGCCCAAACCTATGCAGCAGCAA TTCAATCAGCACCCTCAGCAGAGAATACCGACATCAGTTGATATGGCTGGTTCCGGCAGC TTTTATGCTATTGGCTCTACCCCTTTAACCACAGCAAATAGTCAGAGCATGAATGTTGCA AATTTACAATCTAGATCAAGCATGAATCAGATGTTGGTTTCCAATCAGCTAAACATTCAG TCCGTCCAGCAACAGTCCCAGATAAAAAATGGGCCTTTGGATCAAACAGAGAAGGTGAAT TTTCAGTCAACACAGCTGACTCATGATCAACTACTACACCAGCACCCAATGTCGCAGCAT CAGGTGCAACCTAATTCCCAGTTTATTCAAAATCAGTATCATATAAATCAGCAGCAGCCA AATTCACAGCATCAGCAGGCTATGTTAAGGAACAATTCCCTTAAACAGTCTCAAATGGCT TCCAACCATTCAATGCAACTGCCAGAACAGGGGACTCTGCCACACACTGAACTAGTTTCT TCACAAGCTAGTGATCCTGCTGACCTTCCAAACTTCCAGGGTCAATACCAGCAAAGAAAT GCTCTTGACAATGTTAAAGGAGGGCAGATGCTTGGTCATCTATCTAGCTCTCAAAATTTT CTTCCTTCTGCCTCACATGGTTCTCAGCAATTGTTGCCCTCTAATCCGCAGCTTGATAAC GGTTCAAATGCTGTAAGTTATGTGCTGAAAGGATCACAGACAGAGCAAATGCTGCTTTCT CAATGGCAGCCACAAACAATGGAAAAGGCTCCTGTCGCTACTAATTCATCACTCGAAAAA CAAGTACAAGAAGATTGTTGTCAAAGAATAATGTCACAAGATGGAGTACAGCAACCATTT TCATCAGATTGGTGTCTTTCTAATGGCACTCTCGCTTCTGTTGATCCTGCAGTGCCAAAA CCCACAGCTGGAGGGTTTGGGCAGGTCAAGAGAAATATTCATTACCTCCGTCAGATAAAG TGGTTGCTGTTGCTGTTTCATGCAAAAACATGCACATACCCTGTTGGAAGTTGTAAGTTC AATGGTTGTGTTCAGGTGCAGGAGCTTTTGAACCATTTTCAGAATTGTCAAAGGAAAGAT TGTTCGTACAGGAGTTGCACTAAGTCAAAAGCAATGTCTCACCATTATAAAACTTGTGTC GATGAGCAATGTCCTGTGTGCAGCGTTGTAAGGAAGTTTTTGCGCCAATCAACTGAACAG GCATCTAAGCAAAAAACTCTTGAGTCTAGAAAACTTGCTCAACAAAATGTGCCTCAGAGA ATCATGAACGGGATAGAAGGTGATAGAATGGATGTTGATCCAATGTCAGCTGAAGCGTTC GAGGATCAACCATCTGTTCCAAAACGTTTAAAGATGCATCTTCCATCACTCAGTGGCCCA GAAAATGATATCTCTGTAGTCTCCAATCATCATGTAAACCCAGGCTTTCTATTGCAGGAA GCACAGCCTGAGCAGCTTGAGCACAATAATAGGACAACATATCTGAAACGAGAGGTAGAT GCAAAGGCTGACATTCGGGCTCCTCAAAAGCCCATAAAAATAAGTTATGACATTGATGAA AATGTGACTACATCAAGGCATAATGTGATTCCTGGTGTTCCCAGTGAGATGGACTCTCAT ATCAAGCAAGAAAACTTGTCAGTTAACAAAGAGACAAGTGAAACTGCCCTTGAGGTTAAA AATGAAACAAATGATCTAACTGATGCGACTGTGACTAAATCAGGAAAACCAAAAATAAAA GGTGTTTCTATGATTGAATTGTTCTATCCAGATGAAGTAGATGTACATATTGACAGTCTA AAGCTGTGGGTTGGTCAGAGTAAGGCTAAAGCTGAAAAGAATCAAGCTATTGGTCATTCT GAGAATGAGAACTCTTGCCAGCTCTGTAGAGTAGAGAAACTTACTTTTGAACCTCCACCA ATGTATTGTTCTCCTTGTGGAGCTCGGATAAAGCGAAACGCACCATACTACGCTGTAGGT ACTGGTGATACACGCCACTATTTATGTATCCCTTGCTACAACGAGTCTCGTGGTGAGACT ATTGAGGTTGAAGGTCAAACATTTCCGAAGGCAAAGTT