Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053987_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:4:244609348:244612750:-1 gene:Zm00001d053987 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	ATGGATGTTCCTCAGTTGACTGCTGAAGGTGCCACACAACTTGGAGATAGAGTGTCTTTA TTACACCAGACAGGGACACTTCAGTCAGAAACTCCTTGTCTGACCTTAGGCCGTGATTCT AATGCAGTATCAATGGAGAAGCTGCATGCTAGCGATTGCTTGCCCTGTGGTAAAGAGAAT GTCGGGACAGGACTACAACCTAAATCTGATCCAGAACGTGCTGATAATAGGATGAGTGTT GCACGTCTTGGGTTGGACCTTAACACAGTAGATAGTCCTGATGTAGCAGAGCCTAACCCT TTCTTCCCTTACAAGAAATTGGGGCAGTCAAAAGTCAGCGATCCATCGGAATGTGGCAGC ACTACTGGTGCTATAGAAGAAAGCGAGTCACACAGAAAGTGGAGAGAAATGAAGCAGAAT GGCTTTCTTTCTTCATTTCATGGGAATGCGGTGGTGCCTAGGCCACGTGGTCGACCCCCC AAAAGGAAAAGGGATGATGAATTCAAAAAGAGCAGTTCCACACAGCATGTACAGGCTAAC AAGTCTGTGAAGGTTGCTGCTCCTAGTGGTCTATTATCTGGGCTAAACCCTGGAATCATT AACCATGTGAGAAATAGCAAGCAAGTTTACTCCATAATAAAGGCTATGGTACACTCTGAG AGGCTTGAGAATGAGAACCACTCTAGTCAAACAGGTGAAAGAGGGAGAGAAGTTAATGAG AGAATTCAGGATCAGAAATATGGTGGTGGTTTCATGAAGTGCCATTTGTTGATAAATGAT AATAATGCGGTGTTTCACCAAACACTGCCTAACACATCGCAGTTCCTTGCACAGGATGGT GATAGTCTTAAACTGCAACTCCCATCCGCAGTCACTATGTCTTCAGATAGGACCTTCAGT ACGTCAGCTGATGATCCTGCATCTAATCATGATTACATGACTGTACTGTCAGTAAAAGCG GCTAGTGTTGCTTCTCAATGGTTGGAATTACTGCATCAGGACATAAGGGGACGTCTTGCT GCTTTAAAGCGCAGCAGGAAGAGAGTCAGAAATGCTCTTCACACGGAACTGCCATACCTA ACCGCGACAGAATTTTCATCTAATCAAGAGAACGAATCATCCATTGCAAATACTTCTGAG ATTGGATGTACTGACAAAGCGGTTTCAGAAGCTCATGTGGCACGATGGAGGTCTCTGTTT GTTCAGATGGACAAAACACTTCAGGAGGAAGGGAAACAGCTGGAGAACAAGTTGAAGCAA GTGCAAGAAATGCAATTGAATTGTGATAAAGGCCTCAAACACATGACCTGTGAAGCTCCT CTGCTAGGACCTATGGCTGAACTATGGAAGCTGAAGAACCCAAATATTTCCGAGAGCGAG TGGGCGGTGCAAGCCGCTGCCGCATCGATCTACTCGACCTGCAACATGGTCATGAGAACG GAGAACGTGCCTTGCTTTTGA

Peptide Sequence

PEP ID	Zm00001d053987_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:4:244609348:244612750:-1 gene:Zm00001d053987 transcript:Zm00001d053987_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	MDVPQLTAEGATQLGDRVSLLHQTGTLQSETPCLTLGRDSNAVSMEKLHASDCLPCGKEN VGTGLQPKSDPERADNRMSVARLGLDLNTVDSPDVAEPNPFFPYKKLGQSKVSDPSECGS TTGAIEESESHRKWREMKQNGFLSSFHGNAVVPRPRGRPPKRKRDDEFKKSSSTQHVQAN KSVKVAAPSGLLSGLNPGIINHVRNSKQVYSIIKAMVHSERLENENHSSQTGERGREVNE RIQDQKYGGGFMKCHLLINDNNAVFHQTLPNTSQFLAQDGDSLKLQLPSAVTMSSDRTFS TSADDPASNHDYMTVLSVKAASVASQWLELLHQDIRGRLAALKRSRKRVRNALHTELPYL TATEFSSNQENESSIANTSEIGCTDKAVSEAHVARWRSLFVQMDKTLQEEGKQLENKLKQ VQEMQLNCDKGLKHMTCEAPLLGPMAELWKLKNPNISESEWAVQAAAASIYSTCNMVMRT ENVPCF

Transcript Sequence

Transcript ID	Zm00001d053987_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:244609348:244612750:-1 gene:Zm00001d053987 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	GATCCATCTCGATTTGAAAACCGCGCAGGAGCTTCGCGTCTCTTCCTCCCTCACTACCGC TCCGCTCCGCTCCAAAACCCTAGACGGCGCCCGCAGCCCGGAGCCCCGGATCCGCGTCCC GCTCCCCCGGCGTCTCTGCCCGCTGTCGCCGGCTCCCCGATGGACCTCGCGGGGCCGCGC GGGGCCACGGATCCCGCCGGATCGAGGGCCGCGCCGCCGCACGAGGAATTGGACGGGAGA GGAGGAGGGGCGTGCAGCGGCGCGGCAGCAGTGGAGGGGAGCGCGTGGCGGCTGGCGGTC GCTGGACTGGGAGGTGAGGCCACCCCGCTTCGTGATGTTTCTCGCGCTGTCGTCCCGATC CATGCTTGCCCCCATGCACATGCCTTTACCTTAAATCGGAACGGGCTGGACTAGAAACTG GTGTCAGTTCGTTGGGGCTGTCGTTGTGCTGCTTAGATCTCTAGGCCCCGATGCGTGTTC TTCAGCACCTCAGTAAGACGAAATTTGGTTGCATCACACTCTTTTTAGCAGTCCAACAGT AACTAAGAATTCACATCTACTACATCTTATTAAAGTTTCAACTAGTATCAACTCAGTCTA CATACGCAGAATTGGAACACTGTTACACACTGCCCATGTCATAAACTCATAATATCTCTG TGAATCGAATTTGAAATGGAAAATGCCTGTTTCTTTTGTCTGATAAGTCATTTGTTTTTT ACTCTGTGCTCAAATAACTTCGTCCTGTAGATCCAAGGGCCGGAGTTCTGGAATCTTTGG GTCAACCTGAAGCACATTTGCACACATGTACCATGGATGTTCCTCAGTTGACTGCTGAAG GTGCCACACAACTTGGAGATAGAGTGTCTTTATTACACCAGACAGGGACACTTCAGTCAG AAACTCCTTGTCTGACCTTAGGCCGTGATTCTAATGCAGTATCAATGGAGAAGCTGCATG CTAGCGATTGCTTGCCCTGTGGTAAAGAGAATGTCGGGACAGGACTACAACCTAAATCTG ATCCAGAACGTGCTGATAATAGGATGAGTGTTGCACGTCTTGGGTTGGACCTTAACACAG TAGATAGTCCTGATGTAGCAGAGCCTAACCCTTTCTTCCCTTACAAGAAATTGGGGCAGT CAAAAGTCAGCGATCCATCGGAATGTGGCAGCACTACTGGTGCTATAGAAGAAAGCGAGT CACACAGAAAGTGGAGAGAAATGAAGCAGAATGGCTTTCTTTCTTCATTTCATGGGAATG CGGTGGTGCCTAGGCCACGTGGTCGACCCCCCAAAAGGAAAAGGGATGATGAATTCAAAA AGAGCAGTTCCACACAGCATGTACAGGCTAACAAGTCTGTGAAGGTTGCTGCTCCTAGTG GTCTATTATCTGGGCTAAACCCTGGAATCATTAACCATGTGAGAAATAGCAAGCAAGTTT ACTCCATAATAAAGGCTATGGTACACTCTGAGAGGCTTGAGAATGAGAACCACTCTAGTC AAACAGGTGAAAGAGGGAGAGAAGTTAATGAGAGAATTCAGGATCAGAAATATGGTGGTG GTTTCATGAAGTGCCATTTGTTGATAAATGATAATAATGCGGTGTTTCACCAAACACTGC CTAACACATCGCAGTTCCTTGCACAGGATGGTGATAGTCTTAAACTGCAACTCCCATCCG CAGTCACTATGTCTTCAGATAGGACCTTCAGTACGTCAGCTGATGATCCTGCATCTAATC ATGATTACATGACTGTACTGTCAGTAAAAGCGGCTAGTGTTGCTTCTCAATGGTTGGAAT TACTGCATCAGGACATAAGGGGACGTCTTGCTGCTTTAAAGCGCAGCAGGAAGAGAGTCA GAAATGCTCTTCACACGGAACTGCCATACCTAACCGCGACAGAATTTTCATCTAATCAAG AGAACGAATCATCCATTGCAAATACTTCTGAGATTGGATGTACTGACAAAGCGGTTTCAG AAGCTCATGTGGCACGATGGAGGTCTCTGTTTGTTCAGATGGACAAAACACTTCAGGAGG AAGGGAAACAGCTGGAGAACAAGTTGAAGCAAGTGCAAGAAATGCAATTGAATTGTGATA AAGGCCTCAAACACATGACCTGTGAAGCTCCTCTGCTAGGACCTATGGCTGAACTATGGA AGCTGAAGAACCCAAATATTTCCGAGAGCGAGTGGGCGGTGCAAGCCGCTGCCGCATCGA TCTACTCGACCTGCAACATGGTCATGAGAACGGAGAACGTGCCTTGCTTTTGATACCACA CTTGTACTTTAGTTTTTTGCTTTGGGCGTGTTCGGCTGGCTACAAGCCGACACTGTTGCA GCTGTTTGGATTGCTGCAGCTGCAATCCATAGAGAGAAAAATACTGTAGAAGCCGCAGCC GCAGCCGGATTGCAGCCGCAGCAAGCCGCAGCGAACAAGCTTACCTCAAACCAGGTCTTC TTTCTTACCTTTACCCTATGTGAATCGTGATCCCTTGTCCATTACAGTAGTGGCGACTGG CGAGTGATGTAACAAGAACAAACTTGTGATGTATGTTATCCCGAGCCTACAATTTCACAG GCACATGAAACAG