Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053976_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:244546944:244550190:-1 gene:Zm00001d053976 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRA1 family protein H
Sequence

ATGGCGGCCTCGTCGTCGTTCAAGCCGAACCCGCTGTCGCTGAGCGTGCCGGACCCCGCG
CTCGACCGCTGGCTCCGGGACACCGGTTACCTCGACCTCCTCGACTCCACCCCCACCGGA
GGGCCGTCGTCAGCCTCAGCCCCCTCCACCTCCAGCCCCGCCGCGGGCCCGGACTCATCT
GGCGTCGCGGTCGACATCCTCGCCTTCGCGCGCACCCTCGCCTCGCTCCTCGCGCTCAAC
CCCTTCGCGCGCCTCTCCGCCACCGACCTGGCCGCGCCCACCCCTTCCTGGTCGCTTGCC
TTCCTAGGCACCCCCGGCGCCGCGTCCTACTCCTGGCCGCCCACACCCACCCAGGCCAGG
CTCCGCGTCCAGGAGAACGTCCGCCGGTACGCGCGCAACTACGCCGCGCTCACCATCCTC
GTCTTCGCGTGCTGCCTGTACCGGATGCCGATGGCGCTGCTGGGGATGCTGGTCAGCCTC
GCCGTCTGGGAGGGCGTGCGCTACTGCCGGGACCATTGGGGTCTTACCACCAGGGCTCCA
GGGGTTGCCCAGGCTCTGTTGCACTGTGCGCAGATTGCTACCGCCATACTCCTGTACGTC
TGCAACCTACAGTTTGCTCTCGTGTACGCCATCGGATTGAGCTATGCGTTGATGATGTTG
CACGCCTCGCTTCGGAAGTTGACTCCCTCGAGTCTACCAGATCCCAGCAGCAAGCAGAAC
AGGAGGGCGCAGCCGAGACGGATCTAG

Peptide Sequence

PEP ID

Zm00001d053976_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:244546944:244550190:-1 gene:Zm00001d053976 transcript:Zm00001d053976_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRA1 family protein H
Sequence

MAASSSFKPNPLSLSVPDPALDRWLRDTGYLDLLDSTPTGGPSSASAPSTSSPAAGPDSS
GVAVDILAFARTLASLLALNPFARLSATDLAAPTPSWSLAFLGTPGAASYSWPPTPTQAR
LRVQENVRRYARNYAALTILVFACCLYRMPMALLGMLVSLAVWEGVRYCRDHWGLTTRAP
GVAQALLHCAQIATAILLYVCNLQFALVYAIGLSYALMMLHASLRKLTPSSLPDPSSKQN
RRAQPRRI

Transcript Sequence

Transcript ID

Zm00001d053976_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:244546944:244550190:-1 gene:Zm00001d053976 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRA1 family protein H
Sequence

ACTGTCGTGTGCCCACGCACAGTCACACGGACATGTTAATCCTCTTCCCCTGGTGAGGTC
TCGCGGCGGCGGGCAAATCCATTCGACGATCCCAATGGCGGCCTCGTCGTCGTTCAAGCC
GAACCCGCTGTCGCTGAGCGTGCCGGACCCCGCGCTCGACCGCTGGCTCCGGGACACCGG
TTACCTCGACCTCCTCGACTCCACCCCCACCGGAGGGCCGTCGTCAGCCTCAGCCCCCTC
CACCTCCAGCCCCGCCGCGGGCCCGGACTCATCTGGCGTCGCGGTCGACATCCTCGCCTT
CGCGCGCACCCTCGCCTCGCTCCTCGCGCTCAACCCCTTCGCGCGCCTCTCCGCCACCGA
CCTGGCCGCGCCCACCCCTTCCTGGTCGCTTGCCTTCCTAGGCACCCCCGGCGCCGCGTC
CTACTCCTGGCCGCCCACACCCACCCAGGCCAGGCTCCGCGTCCAGGAGAACGTCCGCCG
GTACGCGCGCAACTACGCCGCGCTCACCATCCTCGTCTTCGCGTGCTGCCTGTACCGGAT
GCCGATGGCGCTGCTGGGGATGCTGGTCAGCCTCGCCGTCTGGGAGGGCGTGCGCTACTG
CCGGGACCATTGGGGTCTTACCACCAGGGCTCCAGGGGTTGCCCAGGCTCTGTTGCACTG
TGCGCAGATTGCTACCGCCATACTCCTGTACGTCTGCAACCTACAGTTTGCTCTCGTGTA
CGCCATCGGATTGAGCTATGCGTTGATGATGTTGCACGCCTCGCTTCGGAAGTTGACTCC
CTCGAGTCTACCAGATCCCAGCAGCAAGCAGAACAGGAGGGCGCAGCCGAGACGGATCTA
GGTTAACATGCCGGACAGTACAGATGTTCATCAGGACATAAACTGGAGTATTATACGCAC
ACACTGAAGCTCCGCCCTTGGATTTAATCCTCAGCTTTCTTTTGCAATATAATTTTAGCT
GATCGTTGATCAAAATTAATAAAATTTGTGCTTTGCCTTGTCAAACTCAAATACA