Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053962_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:244374978:244377262:1 gene:Zm00001d053962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain-containing protein EMB506 chloroplastic
Sequence

ATGCTCGTGTGGGCGGCCACCGCGTCACCACCCAGCACTCCATCCGCCGTGCCATTTGCT
CCTCCCCACCGCGCCGCCGCTCCCCGCCCTCCACCGCCTCTCTGCCGCTCGCTCCCGGGG
CTGCTGTGCGCGGGCCTGATCCCTCCGCCGCGCGCCGCCGCTTCTGACGGCGACGTCTTC
TGGGAGGAGCCAGACGACGGCTCCGGGAGCGACTACGAGGACGACGGCCCGGAGCAAAGG
AGGGCCTTGCGTTTCCCATCTTCCTCGCCGTCCTACAGGCTCGAGGCGTCGGCGCAGCAA
GAACAGGACCTCCGGAGAGAGATCGAGCTTCTCCTAACGCCTGAAGAAAAGGCTACTTTG
GACCAGCATGAGACCCCTGACGTCACTAGAATATCATCACCCAAGTGGCACCCACTTCAT
AGCTACGCGTTGGCACTGCAGATACCCCTCATGGACAAGCTTCTGAACAGCGGTGTTGAC
ATCAACTTAGTTGATAGAGATGGCTTCACCTCTCTTCACAAGGCTGTCATAGGGAAAAAA
GAGGCTGTCATTAGCCATCTCCTAAGAAAAGGGGCAAATCCCCATGTTAGAGATAGGGAT
GGAGCCACACCATTACATTATGCTGTTCAAGCTGGTGCCCTGCAAACCGTGAAGTTACTG
ATTAAGTACAAGGTTGATGTCAATGTTGCCGATAATGATGGATGGACACCACTCCATTTA
GCCATACAGAGTAGGAATAGAGATATAGCTAAGGTCTTGCTTGTCAATGGTGCGGATAAG
ACAAGAAGAACCAAGGATGGGAGGACTGCGCTGGATCTAAGTCTATGCTTTGGAAGGGAT
TTCAAGTCATATGATCTTGCAAAGCTTGTCAAGCTTATTCCAGCAAACAGAGGTGCGTGA

Peptide Sequence

PEP ID

Zm00001d053962_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:244374978:244377262:1 gene:Zm00001d053962 transcript:Zm00001d053962_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain-containing protein EMB506 chloroplastic
Sequence

MLVWAATASPPSTPSAVPFAPPHRAAAPRPPPPLCRSLPGLLCAGLIPPPRAAASDGDVF
WEEPDDGSGSDYEDDGPEQRRALRFPSSSPSYRLEASAQQEQDLRREIELLLTPEEKATL
DQHETPDVTRISSPKWHPLHSYALALQIPLMDKLLNSGVDINLVDRDGFTSLHKAVIGKK
EAVISHLLRKGANPHVRDRDGATPLHYAVQAGALQTVKLLIKYKVDVNVADNDGWTPLHL
AIQSRNRDIAKVLLVNGADKTRRTKDGRTALDLSLCFGRDFKSYDLAKLVKLIPANRGA

Transcript Sequence

Transcript ID

Zm00001d053962_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:244374978:244377262:1 gene:Zm00001d053962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain-containing protein EMB506 chloroplastic
Sequence

GTCTCCGTCATTTCTATCAGACGCAAGCAGCAGTGACGCCGCGCTACCCGACCAAAATCC
GCCGCCGGTGCCCAGAACTCGACGGGAAAACCGGGGCTTTGGTCGCCGGACGCCGGCTGC
CTCGAGATGCTCGTGTGGGCGGCCACCGCGTCACCACCCAGCACTCCATCCGCCGTGCCA
TTTGCTCCTCCCCACCGCGCCGCCGCTCCCCGCCCTCCACCGCCTCTCTGCCGCTCGCTC
CCGGGGCTGCTGTGCGCGGGCCTGATCCCTCCGCCGCGCGCCGCCGCTTCTGACGGCGAC
GTCTTCTGGGAGGAGCCAGACGACGGCTCCGGGAGCGACTACGAGGACGACGGCCCGGAG
CAAAGGAGGGCCTTGCGTTTCCCATCTTCCTCGCCGTCCTACAGGCTCGAGGCGTCGGCG
CAGCAAGAACAGGACCTCCGGAGAGAGATCGAGCTTCTCCTAACGCCTGAAGAAAAGGCT
ACTTTGGACCAGCATGAGACCCCTGACGTCACTAGAATATCATCACCCAAGTGGCACCCA
CTTCATAGCTACGCGTTGGCACTGCAGATACCCCTCATGGACAAGCTTCTGAACAGCGGT
GTTGACATCAACTTAGTTGATAGAGATGGCTTCACCTCTCTTCACAAGGCTGTCATAGGG
AAAAAAGAGGCTGTCATTAGCCATCTCCTAAGAAAAGGGGCAAATCCCCATGTTAGAGAT
AGGGATGGAGCCACACCATTACATTATGCTGTTCAAGCTGGTGCCCTGCAAACCGTGAAG
TTACTGATTAAGTACAAGGTTGATGTCAATGTTGCCGATAATGATGGATGGACACCACTC
CATTTAGCCATACAGAGTAGGAATAGAGATATAGCTAAGGTCTTGCTTGTCAATGGTGCG
GATAAGACAAGAAGAACCAAGGATGGGAGGACTGCGCTGGATCTAAGTCTATGCTTTGGA
AGGGATTTCAAGTCATATGATCTTGCAAAGCTTGTCAAGCTTATTCCAGCAAACAGAGGT
GCGTGATTTCGCTCTGCCATGAATCTGAGGGAAAGAAAGTCCAAAAGTTAGCCAATGCAG
CAGCCTCATACGACCCATGCATAGCTTATGAAGAAGGGTCCAGGAGCCGCGTGCCGCCGT
GCCAGTCATCATTCATTTTTTTTTTCTTGACCGCCAACTCAAACGATCTGACAGATTGCT
CTACAATTGTGCCGTTAGATTTCAGTGTCCATGGTCTGTAGCCTGTTCGACGTGACTCGA
AAAATGATGATGTACATGCAACAGTCCTCCAGCTGTTGTGTTCAGTTGTTTTGTTCAATA
TGGGCCAGGGCCACCAAAACAAGATCTGAATTGTAACTGTTATTAACCTTCAGCATATGT
GTACACATT