Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053927_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:4:243705883:243710688:-1 gene:Zm00001d053927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	ATGGTGGAGCTCACCTCCTTATCCCCAGGGCCACCACGTCCTTCTCGGCTGACTCCTCGC CGCCGGCCGCCGCCGCCGACACCTCATGTTCATACCTCCTCGCGTCGTCGCGGGAGGATC CTCGGCGCCGCGACCGCCACGCCTGGCGCCGACGACTACCACTCCACCATCCGCTCCCTC AACTCCCGCGGCCGCCACGTCCCCCGAAAATCCCTCGGGCAGAACTACACGCTCAACTCC AAGGTGAACGAGGAGCTGGTGGCGGCGGCGGGGGTGGAGGAGGGTGACGTCGTGCTCGAG ATCGGCCCAGGCACCGGCTCGCTCACTTCCGCGCTGCTCCAGGCCGGCGCTACCGTCTTT GCCGTCGAGAAGGACAAGCATATGGCTACTCTCGTTAAAGATAGGTTTGGATCTACAGAA CAGTTGAAGGTCATTGAAGAAGACATCACAAAATTTCACATCCGTTCCCATTTTCTTCCT TTCATGAAGGAGAAATACGGTGCCACCAAAAAACTTGCAAAGGTTGCATCAAACTTACCA TTCAATGTCAGCACCGAAGTTGTCAAACTACTACTCCCAATGGGGGATGTTTTCTCTGTC GTGGTGCTTATGCTTCAGGATGAAACAGCAGTACGCCTTGCAGATGCTTCAATACAAAGT CCAGAGTACCGATCTATCAATGTGTTTGTGGATTTTTACTCGGAACCTGAATACAAGTTC AGAGTAGACAGAGAGAATTTTTTCCCTCGGCCTAAGGTAATATATTTCTTACATGTTGAT GGTGCTGTTATCAGCTTCAAACTAAAGAATGCGGAGGAGTATCCGCCAGTTAGTTCCCCA AAAAGCTTCTTTTCAATGGTGAATTCCGCTTTCATGGGGAAGCGCAAGATGCTTAGGAAA TCTCTTCAGCACATATGCTCTTCTTCTGAGATTGAGGCTGCTCTTGACAACATTGGCCTT CCAGTTACAGTAAGCTTTCGCTCTCTCCTTCTGCGTCCCCTCCTCCCACTCTCCCTGCGT GCATGTGCTGTTGTGCTCACTTGTCAACTGCTGGCAGGCTAG

Peptide Sequence

PEP ID	Zm00001d053927_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:4:243705883:243710688:-1 gene:Zm00001d053927 transcript:Zm00001d053927_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	MVELTSLSPGPPRPSRLTPRRRPPPPTPHVHTSSRRRGRILGAATATPGADDYHSTIRSL NSRGRHVPRKSLGQNYTLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTSALLQAGATVF AVEKDKHMATLVKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKYGATKKLAKVASNLP FNVSTEVVKLLLPMGDVFSVVVLMLQDETAVRLADASIQSPEYRSINVFVDFYSEPEYKF RVDRENFFPRPKVIYFLHVDGAVISFKLKNAEEYPPVSSPKSFFSMVNSAFMGKRKMLRK SLQHICSSSEIEAALDNIGLPVTVSFRSLLLRPLLPLSLRACAVVLTCQLLAG

Transcript Sequence

Transcript ID	Zm00001d053927_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:243705883:243710688:-1 gene:Zm00001d053927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	ATACCCGTCCCCTAATAGGGGAATTCCCCACGGGGAATCGGGGATCGGGTCCCATTGCCA TCTCTACACTGTAGAACTCCATCCAAAAGTCTTACACCCTTTATTCTTACGAAACTATAT GAGGAAAAGCGAAAGGGGAGGAAAATAAGGGCGAGCAAAACTGGAAGCCTACGAAAATGG TGGAGCTCACCTCCTTATCCCCAGGGCCACCACGTCCTTCTCGGCTGACTCCTCGCCGCC GGCCGCCGCCGCCGACACCTCATGTTCATACCTCCTCGCGTCGTCGCGGGAGGATCCTCG GCGCCGCGACCGCCACGCCTGGCGCCGACGACTACCACTCCACCATCCGCTCCCTCAACT CCCGCGGCCGCCACGTCCCCCGAAAATCCCTCGGGCAGAACTACACGCTCAACTCCAAGG TGAACGAGGAGCTGGTGGCGGCGGCGGGGGTGGAGGAGGGTGACGTCGTGCTCGAGATCG GCCCAGGCACCGGCTCGCTCACTTCCGCGCTGCTCCAGGCCGGCGCTACCGTCTTTGCCG TCGAGAAGGACAAGCATATGGCTACTCTCGTTAAAGATAGGTTTGGATCTACAGAACAGT TGAAGGTCATTGAAGAAGACATCACAAAATTTCACATCCGTTCCCATTTTCTTCCTTTCA TGAAGGAGAAATACGGTGCCACCAAAAAACTTGCAAAGGTTGCATCAAACTTACCATTCA ATGTCAGCACCGAAGTTGTCAAACTACTACTCCCAATGGGGGATGTTTTCTCTGTCGTGG TGCTTATGCTTCAGGATGAAACAGCAGTACGCCTTGCAGATGCTTCAATACAAAGTCCAG AGTACCGATCTATCAATGTGTTTGTGGATTTTTACTCGGAACCTGAATACAAGTTCAGAG TAGACAGAGAGAATTTTTTCCCTCGGCCTAAGGTAATATATTTCTTACATGTTGATGGTG CTGTTATCAGCTTCAAACTAAAGAATGCGGAGGAGTATCCGCCAGTTAGTTCCCCAAAAA GCTTCTTTTCAATGGTGAATTCCGCTTTCATGGGGAAGCGCAAGATGCTTAGGAAATCTC TTCAGCACATATGCTCTTCTTCTGAGATTGAGGCTGCTCTTGACAACATTGGCCTTCCAG TTACAGTAAGCTTTCGCTCTCTCCTTCTGCGTCCCCTCCTCCCACTCTCCCTGCGTGCAT GTGCTGTTGTGCTCACTTGTCAACTGCTGGCAGGCTAG