Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053927_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:4:243694728:243698285:-1 gene:Zm00001d053927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	ATGAGGCCAGTTTTTTGCGGGAACCTTGACTATGATGTTCGCATCTCTGAGGTCGAGCGC CTTTTCGGGAAGTATGGAAGGGTGGAACGAGTGGATCTGAAGACAGGGTTTGCATTCATC TACATGGAAGACGAACGTGACGCTGAAGATGCTATCAGTAGACTTGATGGAATTGATTTT GGCAGAAAAGGAAGGAGAATCAAAGTTGAGTGGACCAAGGAGGATCGCACTGCTGATCGA AGAGGCAACTCAAGGAGGTCTCCAACCAATGCAAAACCGACCAAAACCTTGTTCGTGATC AACTTTGACCCGATCAACACGAGAATTCGAGATCTGGAGAGGCACTTTGATAAATATGGC AGGGTCGCGAATGTAAGGATCAAAAAGAACTTCGCCTTTATACAGTTTGAGGCGCAGGAG GATGCTACTAGAGCATTGGAGGGTGCTAATGGGAGCCATTTCATGGACAGGGTCATCTCA GTTGAGTATGCGCTCCGTGACGACGATGAAAAAGGTGAAAGGGCGACGAACGGATACAGC CCAGACAGGAGAGGCCGCGAAAGATCCCCAGGTGCAAGACGGTCTCCTAGTCCTTACGGC AGAGGTCGGGAGAGAGGTAGCCCAGACTATGGGAGAGGCAAGGAGAGGGGCAGCCCAGAC TACGGCAGGGGAGGCCGCAGCCCTGATAATGGCAGGGGAGGCCGCCCAGCCGGCGGTGGC GGCGGCGGCAGAGGTGATCACGCCAGGGGAGGAGGACGACGACGCAGCCCTGACTATTAT GACCGCGAGCGCCGAGAAGCTAGTCCTGGCTATGACAGGCCCCCCAGCTGCTCACCTGGA ACTGGGAGGGACGCGAGAGACTAG

Peptide Sequence

PEP ID	Zm00001d053927_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:4:243694728:243698285:-1 gene:Zm00001d053927 transcript:Zm00001d053927_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	MRPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTGFAFIYMEDERDAEDAISRLDGIDF GRKGRRIKVEWTKEDRTADRRGNSRRSPTNAKPTKTLFVINFDPINTRIRDLERHFDKYG RVANVRIKKNFAFIQFEAQEDATRALEGANGSHFMDRVISVEYALRDDDEKGERATNGYS PDRRGRERSPGARRSPSPYGRGRERGSPDYGRGKERGSPDYGRGGRSPDNGRGGRPAGGG GGGRGDHARGGGRRRSPDYYDRERREASPGYDRPPSCSPGTGRDARD

Transcript Sequence

Transcript ID	Zm00001d053927_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:243694728:243698285:-1 gene:Zm00001d053927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA small subunit methyltransferase chloroplastic
Sequence	CAAATTTTCGTTCACCTGGCTTCACCCACCCGCGTGCCCTCGCCGACAACTGAGCCACCG CCGCCGCCGCCCTACCCCCAGGTGCCCAGGTCGTTTCGGTCCCTTTGCCAGGTCTTCGCC GGCGACGAGCACCAGCCACCAGCCAGGGAATATAACTTTGACCTGTAAAATGAGGCCAGT TTTTTGCGGGAACCTTGACTATGATGTTCGCATCTCTGAGGTCGAGCGCCTTTTCGGGAA GTATGGAAGGGTGGAACGAGTGGATCTGAAGACAGGGTTTGCATTCATCTACATGGAAGA CGAACGTGACGCTGAAGATGCTATCAGTAGACTTGATGGAATTGATTTTGGCAGAAAAGG AAGGAGAATCAAAGTTGAGTGGACCAAGGAGGATCGCACTGCTGATCGAAGAGGCAACTC AAGGAGGTCTCCAACCAATGCAAAACCGACCAAAACCTTGTTCGTGATCAACTTTGACCC GATCAACACGAGAATTCGAGATCTGGAGAGGCACTTTGATAAATATGGCAGGGTCGCGAA TGTAAGGATCAAAAAGAACTTCGCCTTTATACAGTTTGAGGCGCAGGAGGATGCTACTAG AGCATTGGAGGGTGCTAATGGGAGCCATTTCATGGACAGGGTCATCTCAGTTGAGTATGC GCTCCGTGACGACGATGAAAAAGGTGAAAGGGCGACGAACGGATACAGCCCAGACAGGAG AGGCCGCGAAAGATCCCCAGGTGCAAGACGGTCTCCTAGTCCTTACGGCAGAGGTCGGGA GAGAGGTAGCCCAGACTATGGGAGAGGCAAGGAGAGGGGCAGCCCAGACTACGGCAGGGG AGGCCGCAGCCCTGATAATGGCAGGGGAGGCCGCCCAGCCGGCGGTGGCGGCGGCGGCAG AGGTGATCACGCCAGGGGAGGAGGACGACGACGCAGCCCTGACTATTATGACCGCGAGCG CCGAGAAGCTAGTCCTGGCTATGACAGGCCCCCCAGCTGCTCACCTGGAACTGGGAGGGA CGCGAGAGACTAGAAAAGCGCCCCATGCCTGTGTTGTAGAATTCAAGCATCAAAGCCTCC CGCGTCAGATGAAGTTAGAGTTGGTGATGTTAGCCAGCAGGAAACTCGTTTACTTATGTG CGTTAGCTCGTGCTGACTTTGCAAGTTAGCTTACCATTTCCCATTTGCGACTCCAGAATG TAACTCGTATGGTCTGGAATGGTAGCTTTCAGGACTCGTTTGAACCTTTCTTGGAGTTTT TTTCTTCTTTTCCGGCTACCTTGATTGCCCTGTGCATGCGCTGATGAATCTACAGATTGT TTCGTCTGTCAAGTGTTCCGCTGTAATGTAAGAGACG