Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053919_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:4:243648747:243651842:-1 gene:Zm00001d053919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase complex subunit SAP18
Sequence

ATGGCAGGCATGACCGATATGCCGATGAGGCCGGCGCGGCCGGGCCCGCCGATGCAGCAC
CGGGGCCCTCCGCCGATGGCGCGCCTCCGCCCCGAACCAATCGACCGCGAGAAGACCTGC
CCTCTGCTGCTCAGGGTTTTCACAAGGGTTGCTGGTCACCACCAAAATGAAGAGTTTTCT
GTGAGAGGGAAAGAACCAAAGGATGAAGTTCAGATTTACACATGGAAGGATGCCACTCTC
CGTGAGCTTACTGATCTTGTGAAAGAGGTTGCTCTTCCAGCAAGGAAAAGGAACGCGAGG
CTTTCTTTTGCATTTGTATACCCAGACAAGAATGGTCGTTTTGTTGTCAGACAGGTAACG
CTATAA

Peptide Sequence

PEP ID

Zm00001d053919_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:4:243648747:243651842:-1 gene:Zm00001d053919 transcript:Zm00001d053919_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase complex subunit SAP18
Sequence

MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVFTRVAGHHQNEEFS
VRGKEPKDEVQIYTWKDATLRELTDLVKEVALPARKRNARLSFAFVYPDKNGRFVVRQVT
L

Transcript Sequence

Transcript ID

Zm00001d053919_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:243648747:243651842:-1 gene:Zm00001d053919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase complex subunit SAP18
Sequence

AAATGACTAAATTTTAGTCATCCCAAACCAAACGAGGTCTTCATTGATCTCAAGGGAGGA
AACTGCAAAATTTAGGGTTTGTTTGGCCCTATTCGCACACACCCACGCCGTCGGATCCTC
CTGCCCTCCCCACGTCCACCTCTCTCCGCCGAAGAATCGGCGGCGGCGGCGGCGGCGGCG
AGCGCCTTCCCTTGTCAAAATCCACCCGGCGGCAGAGCAGAGCCTCGTTGCTGAGGAGGG
GAGATGGCAGGCATGACCGATATGCCGATGAGGCCGGCGCGGCCGGGCCCGCCGATGCAG
CACCGGGGCCCTCCGCCGATGGCGCGCCTCCGCCCCGAACCAATCGACCGCGAGAAGACC
TGCCCTCTGCTGCTCAGGGTTTTCACAAGGGTTGCTGGTCACCACCAAAATGAAGAGTTT
TCTGTGAGAGGGAAAGAACCAAAGGATGAAGTTCAGATTTACACATGGAAGGATGCCACT
CTCCGTGAGCTTACTGATCTTGTGAAAGAGGTTGCTCTTCCAGCAAGGAAAAGGAACGCG
AGGCTTTCTTTTGCATTTGTATACCCAGACAAGAATGGTCGTTTTGTTGTCAGACAGGTA
ACGCTATAAGAATTTGGGCATGTTTGGACCCTTAGCTCCATCTCGCCTTGCTTCGCTGGG
CAAACTAGCCTTGCCAGGAAAGGTGGACGCTCTGTTTGTTTCCCTGGGCGGGCTAGGTTA
CTAGGTGCTGTATGCTTTCCTAGTTAAAAACTTGCTTTTGCTTGCAAGCTTTGTGATTTA
ACTGCTTGGTACTCTTGCTCATGGAGAATTGGAGATGCAATCACCAAATTTCCTTAT