Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053917_T036
CDS Infomation	cds chromosome:B73_RefGen_v4:4:243634879:243639681:-1 gene:Zm00001d053917 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair endonuclease UVH1
Sequence	ATGGTCGCCGGTTTCTCCAAGGCCGAGCGTACCATGAAGAGCCTCTACGTCCGCCGTCTC CACCTCTGGCCCCGCTTCCACGTTCTCGCCGCAGCCGACCTGGAACGCGCCCCGCCTGAC GTCGTAGACGTGCGCGTTCCCATGACGCCGCCCATGAGGGGTATCCAGGCTGCTGTCCTC GCTACCATGGACGCTTGTCTCAAGGAACTTAGGCGCACCAACAAGGTGGATGTTGAGGAC CTCACCGTCGACAAGGGCCTCTTCAAGTCCTTCGATGAGATCGTCCGGAGGCAGCTCGAC CCCATCTGGCACACTCTTGGGAAGAAGACAAAGCAGCTTGTGGCTGACCTCAGGACGCTA CGCAAGCTGCTTGATTACCTCGTCAGGTATGACGCCGTTACATACTTGAAGTACCTTGAC ACATTGAGAGTATCAGAAGGTGTCAGATCAGTTTGGATACTTGCTGACTCAAGCCATAGG ATATTTGAGCTTGCAAAAAGGCGCGTTTACCAGGCAGTGAGAACAGATGGTGTTAATGTT AGCATAGATAATAAGGGCACACCAACAAAGAAGAGGAAAGTGGCACATAATTCTACCAAG AAAGGAAAAGTAACTGAAAATGAAGATTCCACTGTAGGTCCCAACACTCAGAAGGCTAAT ACTGATGTGGGCATTGTATTGGAAGAGGTTTTGGAGGAGGCACCGAAATGGAAAGTGTTA TGGGAATTGTTGCAAGAGATAGCAGAACAACGGATGAAGAGCAGTGCCGGGAATGTGCAT GATGAGGACAAAAATGATGAAAGTGGCATAGTTTTGGTATCATGTAAAGATGAACGCACA TGCTTGCAGCTGCAGGAATGCATATTAAAAGGCCCCTGTCAGGATGGCCGTTGCATTGGA CCAACTGTTGCAAATGAACCAGAGCCTCCTTTATGTCAGAACTCAATTACAAGAAAGGCA GGTGGTAAAAAGGCGCCCGAGAAGGAGATGCAGGTTATTGTAGACATGAGAGAGTTCATG AGCAGCCTTCCGAATGTATTACATCAAAAAGGTATCCGAATCGTACCGGTCACCCTTGAA GTTGGTGACTATGTGCTCTCTCCTTTGATCTGTGTTGAACGGAAAAGTATTGCGGACTTG TTCCAAAGCTTTGCTTCTGGTCGTCTGTACAATCAGGTTGAGACAATGGCACGTTACTAC AAGATCCCGGTTCTCCTCATCGAGTTCTCACAAGATAAGAGCTTTTCCTTTCAGTCTGCA AATGAGATTGGTGATGATGTCTCTCCGACCAACATTATCTCGAAGCTTTCTCTGCTAGTG CTGCATTTTCCTCGGCTTCGCATAATCTGGTCACGCAGCTTGCATGCTACAGCAGAAATA TTTATGTCACTGAAAACAAACCAGGATGAACCTGATGAGAAAAAAGCAACAAGAGTTGGC GTGCCATCCGAGGATGGTATCGTGGAGGATGATGTGAGGTCTGAAAATTACAACACATCA GCCATTGAGTTCTTAAGAAGGCTTCCTGGGGTGACGGATTCTAACTACCGAGCAATCATG GATGGATGCAATAGCTTGGCCGAGCTGGCCCTGCTTCCAGTGGAAAGGTTGGCGGAGCTA ATGGGTGGTCAGAAAGCTGCGCGGACGCTCAAGGAGTTTCTCGATGCCAAGTGCCCAACC ATGTTGTAG

Peptide Sequence

PEP ID	Zm00001d053917_P036
PEP Infomation	pep chromosome:B73_RefGen_v4:4:243634879:243639681:-1 gene:Zm00001d053917 transcript:Zm00001d053917_T036 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair endonuclease UVH1
Sequence	MVAGFSKAERTMKSLYVRRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVL ATMDACLKELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTL RKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNV SIDNKGTPTKKRKVAHNSTKKGKVTENEDSTVGPNTQKANTDVGIVLEEVLEEAPKWKVL WELLQEIAEQRMKSSAGNVHDEDKNDESGIVLVSCKDERTCLQLQECILKGPCQDGRCIG PTVANEPEPPLCQNSITRKAGGKKAPEKEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLE VGDYVLSPLICVERKSIADLFQSFASGRLYNQVETMARYYKIPVLLIEFSQDKSFSFQSA NEIGDDVSPTNIISKLSLLVLHFPRLRIIWSRSLHATAEIFMSLKTNQDEPDEKKATRVG VPSEDGIVEDDVRSENYNTSAIEFLRRLPGVTDSNYRAIMDGCNSLAELALLPVERLAEL MGGQKAARTLKEFLDAKCPTML

Transcript Sequence

Transcript ID	Zm00001d053917_T036
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:243634879:243639681:-1 gene:Zm00001d053917 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair endonuclease UVH1
Sequence	GGGAAGAAGGCGAAGGCCGTCGCGCTCTCGGCGGCGGCGGCGGCGGCGGCAGCGGCGATG CTTGCGTTCGAGCACCGATACCCTCAAGGCCCGGATCCGGCGCCGCCTCCAAGACAAGCT GCAGGTTCACGACGTGCCCCCTGACCTCGCCGCGCAGCAGCGCGCCACCCTTTACGCCTC TGGCGCTGCTCTCTTCCTCTCTCCCCGCGCCCTCGCCGCCGACCTCCTCACCTCCCGCCT CCTCCCCTCCCGCGTCCAAGCCCTACTCCTCCTCTCCGCCCACCGCTCCACCGATACCTC CTCCGATGCCTTCATCTGCCGCCTCCTCCGTCAACGCAATCTTCTCCCCGTTTACGCCTT CTCCGATTGCCCCCATGCCATGGTCGCCGGTTTCTCCAAGGCCGAGCGTACCATGAAGAG CCTCTACGTCCGCCGTCTCCACCTCTGGCCCCGCTTCCACGTTCTCGCCGCAGCCGACCT GGAACGCGCCCCGCCTGACGTCGTAGACGTGCGCGTTCCCATGACGCCGCCCATGAGGGG TATCCAGGCTGCTGTCCTCGCTACCATGGACGCTTGTCTCAAGGAACTTAGGCGCACCAA CAAGGTGGATGTTGAGGACCTCACCGTCGACAAGGGCCTCTTCAAGTCCTTCGATGAGAT CGTCCGGAGGCAGCTCGACCCCATCTGGCACACTCTTGGGAAGAAGACAAAGCAGCTTGT GGCTGACCTCAGGACGCTACGCAAGCTGCTTGATTACCTCGTCAGGTATGACGCCGTTAC ATACTTGAAGTACCTTGACACATTGAGAGTATCAGAAGGTGTCAGATCAGTTTGGATACT TGCTGACTCAAGCCATAGGATATTTGAGCTTGCAAAAAGGCGCGTTTACCAGGCAGTGAG AACAGATGGTGTTAATGTTAGCATAGATAATAAGGGCACACCAACAAAGAAGAGGAAAGT GGCACATAATTCTACCAAGAAAGGAAAAGTAACTGAAAATGAAGATTCCACTGTAGGTCC CAACACTCAGAAGGCTAATACTGATGTGGGCATTGTATTGGAAGAGGTTTTGGAGGAGGC ACCGAAATGGAAAGTGTTATGGGAATTGTTGCAAGAGATAGCAGAACAACGGATGAAGAG CAGTGCCGGGAATGTGCATGATGAGGACAAAAATGATGAAAGTGGCATAGTTTTGGTATC ATGTAAAGATGAACGCACATGCTTGCAGCTGCAGGAATGCATATTAAAAGGCCCCTGTCA GGATGGCCGTTGCATTGGACCAACTGTTGCAAATGAACCAGAGCCTCCTTTATGTCAGAA CTCAATTACAAGAAAGGCAGGTGGTAAAAAGGCGCCCGAGAAGGAGATGCAGGTTATTGT AGACATGAGAGAGTTCATGAGCAGCCTTCCGAATGTATTACATCAAAAAGGTATCCGAAT CGTACCGGTCACCCTTGAAGTTGGTGACTATGTGCTCTCTCCTTTGATCTGTGTTGAACG GAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTGTACAATCAGGTTGA GACAATGGCACGTTACTACAAGATCCCGGTTCTCCTCATCGAGTTCTCACAAGATAAGAG CTTTTCCTTTCAGTCTGCAAATGAGATTGGTGATGATGTCTCTCCGACCAACATTATCTC GAAGCTTTCTCTGCTAGTGCTGCATTTTCCTCGGCTTCGCATAATCTGGTCACGCAGCTT GCATGCTACAGCAGAAATATTTATGTCACTGAAAACAAACCAGGATGAACCTGATGAGAA AAAAGCAACAAGAGTTGGCGTGCCATCCGAGGATGGTATCGTGGAGGATGATGTGAGGTC TGAAAATTACAACACATCAGCCATTGAGTTCTTAAGAAGGCTTCCTGGGGTGACGGATTC TAACTACCGAGCAATCATGGATGGATGCAATAGCTTGGCCGAGCTGGCCCTGCTTCCAGT GGAAAGGTTGGCGGAGCTAATGGGTGGTCAGAAAGCTGCGCGGACGCTCAAGGAGTTTCT CGATGCCAAGTGCCCAACCATGTTGTAGCCAGAGTGACGCTGTACTGTTTGTATTGTGTC CTGTGGGATACAAATACTTCAGTTGATGTGCCTTATATATATAT