Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053889_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:4:243043525:243050503:1 gene:Zm00001d053889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cycloartenol synthase1 description: cycloartenol synthase1
Sequence	ATGTTTGGCTCAGCACTGACCTACGTTACTTTGAGATTGCTTGGAGAGGGACCAGATAGT GGAGATGGAGCAATGGAGAAAGGCCGAAACTGGATCTTAGACCATGGCGGAGCAACATAT ATAACATCCTGGGGGAAGTTTTGGCTCTCGGTACTTGGTGTATTTGAATGGTCTGGTAAC AACCCGGTACCACCAGAAGTATGGCTACTGCCATATCTCCTGCCATTTCACCCAGGGAGG ATGTGGTGTCATTGTCGAATGGTGTATTTGCCAATGTGCTACATCTATGGGAAGAGGTTT GTTGGTCGAATCACACCACTCGTGTTGGAATTAAGAAAGGAACTTTTCAAAGACCCTTAC AGCAAGATTGATTGGGACAAGGCCCGCAATCTATGTGCTAAGGAAGATCTGTACTATCCA CATCCATTTGTTCAAGATGTCTTATGGGCCACTCTCCATAAATTTGTTGAACCAGTTATG ATGAGTTGGCCTGGCAGTAAATTGAGGGAGAAAGCTCTGGAGACAGCCATGCAACATGTT CACTATGAGGATGAGAACACTCGGTACATTTGCATTGGTCCTGTAAACAAGGTATTAAAT ATGCTTGCTTGCTGGATTGAAGATCCAAACTCAGAGGCCTTCAAACTCCACATCCCACGA GTCTATGACTACTTGTGGCTTGCTGAAGATGGCATGAAGATGCAGGGTTATAATGGTAGC CAACTTTGGGATACAGCTTTCATAGTTCAAGCCATTGTGGCTACCAACCTTACCGAAGAG TTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAGGTTCTTGACGAC TGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTAAAGGCGCATGGCCATTCTCC ACCGCGGATCATGGTTGGCCTATATCTGATTGCACTGCTGAAGGACTAAAGGCTTCATTA TTGTTATCAAAGATTTCTCCTGAAATTGTTGGTGGACCGATAGAAGCTAATAGATTTTAT GATGCTGTCAGTTGTCTGATGTCTTATATGAATGATAATGGTGGTTTTGCGACTTATGAA CTCACAAGATCCTATGCCTGGCTGGAGCTGATCAATCCTGCTGAGACCTTTGGGGATATT GTGATTGATTACCCGTATGTTGAATGTACATCAGCAGCAATCCAGGCCCTGACATCATTC AGAAAACTATACCCTGGGCACCGCAGGAAAGAGGTGGACAGCTGTATCAGCAAAGCTGCT AATTTCATTGAGAGCATTCAGAAAAGTGACGGTTCATGGTATGGCTCTTGGGCTGTTTGT TTCACGTACGGCACTTGGTTTGGTGTGAAGGGACTAATTGCTGCTGGTAGAACATTTGAG AGCAGTCCTGCAATCAGAAAGGCATGCGGCTTTCTGTTATCAAAAGAGCTTCCTTCCGGT GGCTGGGGAGAAAGCTATTTATCGTCTCAAGACCAGGTTTACACCAATCTCAAAGGCAAC CGAGCTCATGCAGCGAACACTGGTTGGGCCATGCTGGCGCTGATTGATGCAGGACAGGCC CAGAGAGATCCCGCGCCTCTACACCGAGCAGCAAAGGTTTTGATCAACTTGCAGTCAGAG GACGGAGAATTTCCCCAGCAAGAGATCATAGGAGTGTTCAACAAGAACTGCATGATCAGT TACTCCCAGTACAGGAACACCTTCCCGATCTGGGCTCTGGGAGAGTACCGGTGCCGAGTC CTGGGAGCTGGCAAGCGGTAG

Peptide Sequence

PEP ID	Zm00001d053889_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:4:243043525:243050503:1 gene:Zm00001d053889 transcript:Zm00001d053889_T014 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cycloartenol synthase1 description: cycloartenol synthase1
Sequence	MFGSALTYVTLRLLGEGPDSGDGAMEKGRNWILDHGGATYITSWGKFWLSVLGVFEWSGN NPVPPEVWLLPYLLPFHPGRMWCHCRMVYLPMCYIYGKRFVGRITPLVLELRKELFKDPY SKIDWDKARNLCAKEDLYYPHPFVQDVLWATLHKFVEPVMMSWPGSKLREKALETAMQHV HYEDENTRYICIGPVNKVLNMLACWIEDPNSEAFKLHIPRVYDYLWLAEDGMKMQGYNGS QLWDTAFIVQAIVATNLTEEFGPTLKLAHNYIKKSQVLDDCPGDLNDWYRHTSKGAWPFS TADHGWPISDCTAEGLKASLLLSKISPEIVGGPIEANRFYDAVSCLMSYMNDNGGFATYE LTRSYAWLELINPAETFGDIVIDYPYVECTSAAIQALTSFRKLYPGHRRKEVDSCISKAA NFIESIQKSDGSWYGSWAVCFTYGTWFGVKGLIAAGRTFESSPAIRKACGFLLSKELPSG GWGESYLSSQDQVYTNLKGNRAHAANTGWAMLALIDAGQAQRDPAPLHRAAKVLINLQSE DGEFPQQEIIGVFNKNCMISYSQYRNTFPIWALGEYRCRVLGAGKR

Transcript Sequence

Transcript ID	Zm00001d053889_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:243043525:243050503:1 gene:Zm00001d053889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cycloartenol synthase1 description: cycloartenol synthase1
Sequence	ACTTTTTTCCAGAAAAGAAAACATTTCACTGTCCATGGAAATACAGTACCTACGGCCACA GAATGGTTGAAAGTGGACACAGATTTTCTCAACTCCATTCAATTCGCCAAAGAAAATCCT CTTGAGCTTGACCTTCCAGCGATCAAGCTCGGTGAGCACGAAGACGTAACCGAGGAAGCC GTGTCTACTACTTTGAGAAGGGCAATCAGCCGTCTTTCTACTCTCCAGGCACATGATGGA CACTGGCCTGGGGATTATGGTGGCCCTATGTTCCTTATGCCAGGCTTGATCATAACATTG TATGTGACTGGAGCACTAAACACTGTCTTGTCATCAGAACACCAGAAGGAGATCCAATGA AGATGGTGGCTGGGGCTTGCACATTGAGGGTCCAAGCACCATGTTTGGCTCAGCACTGAC CTACGTTACTTTGAGATTGCTTGGAGAGGGACCAGATAGTGGAGATGGAGCAATGGAGAA AGGCCGAAACTGGATCTTAGACCATGGCGGAGCAACATATATAACATCCTGGGGGAAGTT TTGGCTCTCGGTACTTGGTGTATTTGAATGGTCTGGTAACAACCCGGTACCACCAGAAGT ATGGCTACTGCCATATCTCCTGCCATTTCACCCAGGGAGGATGTGGTGTCATTGTCGAAT GGTGTATTTGCCAATGTGCTACATCTATGGGAAGAGGTTTGTTGGTCGAATCACACCACT CGTGTTGGAATTAAGAAAGGAACTTTTCAAAGACCCTTACAGCAAGATTGATTGGGACAA GGCCCGCAATCTATGTGCTAAGGAAGATCTGTACTATCCACATCCATTTGTTCAAGATGT CTTATGGGCCACTCTCCATAAATTTGTTGAACCAGTTATGATGAGTTGGCCTGGCAGTAA ATTGAGGGAGAAAGCTCTGGAGACAGCCATGCAACATGTTCACTATGAGGATGAGAACAC TCGGTACATTTGCATTGGTCCTGTAAACAAGGTATTAAATATGCTTGCTTGCTGGATTGA AGATCCAAACTCAGAGGCCTTCAAACTCCACATCCCACGAGTCTATGACTACTTGTGGCT TGCTGAAGATGGCATGAAGATGCAGGGTTATAATGGTAGCCAACTTTGGGATACAGCTTT CATAGTTCAAGCCATTGTGGCTACCAACCTTACCGAAGAGTTTGGTCCCACCCTTAAACT AGCACACAACTATATCAAGAAATCACAGGTTCTTGACGACTGCCCTGGTGATCTGAATGA CTGGTACCGCCACACATCTAAAGGCGCATGGCCATTCTCCACCGCGGATCATGGTTGGCC TATATCTGATTGCACTGCTGAAGGACTAAAGGCTTCATTATTGTTATCAAAGATTTCTCC TGAAATTGTTGGTGGACCGATAGAAGCTAATAGATTTTATGATGCTGTCAGTTGTCTGAT GTCTTATATGAATGATAATGGTGGTTTTGCGACTTATGAACTCACAAGATCCTATGCCTG GCTGGAGCTGATCAATCCTGCTGAGACCTTTGGGGATATTGTGATTGATTACCCGTATGT TGAATGTACATCAGCAGCAATCCAGGCCCTGACATCATTCAGAAAACTATACCCTGGGCA CCGCAGGAAAGAGGTGGACAGCTGTATCAGCAAAGCTGCTAATTTCATTGAGAGCATTCA GAAAAGTGACGGTTCATGGTATGGCTCTTGGGCTGTTTGTTTCACGTACGGCACTTGGTT TGGTGTGAAGGGACTAATTGCTGCTGGTAGAACATTTGAGAGCAGTCCTGCAATCAGAAA GGCATGCGGCTTTCTGTTATCAAAAGAGCTTCCTTCCGGTGGCTGGGGAGAAAGCTATTT ATCGTCTCAAGACCAGGTTTACACCAATCTCAAAGGCAACCGAGCTCATGCAGCGAACAC TGGTTGGGCCATGCTGGCGCTGATTGATGCAGGACAGGCCCAGAGAGATCCCGCGCCTCT ACACCGAGCAGCAAAGGTTTTGATCAACTTGCAGTCAGAGGACGGAGAATTTCCCCAGCA AGAGATCATAGGAGTGTTCAACAAGAACTGCATGATCAGTTACTCCCAGTACAGGAACAC CTTCCCGATCTGGGCTCTGGGAGAGTACCGGTGCCGAGTCCTGGGAGCTGGCAAGCGGTA GTGACCCGGCCTGGCCCCGTCAACTTGACTGAAAGGCGCTTTGTTGTCTTGGTGTTCTTG GTGTTCTATCTTGGCACGCCGAGGGCTGTCTTGCCGGCCGCCTAGCTGTCTCATGAATCA ATCAGCTTTTTTGTGAGTAGCTAGCTATGTGCGGTGGTTGGAATAATGCAGCTATGCTTT TTTTTAGGGTTGCGCTCCTAGTTCTAATAATGTACTACGTATATTGGAAGCAGAATAAAT GTTAGATTGAACTAATGGTGCCATTAAAGATGACAATAGAACTCTTCCGAAGCAACCAAG TTATTACATTGC