Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053881_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:242880809:242889256:-1 gene:Zm00001d053881 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 2 homolog A
Sequence	ATGTCTCCCCCCGAGAACCCCAGCCCCGCGGCGCCGGCCGAGCCGTCGCAGCCGCCGCCA CCGGCGGCCGCGGCCAAGGGGAAGGGGAAGAAGGACGAGAAGAAGGATGACGATCTGTCG GAGGAGGATCTGGCGCTCAAGGAGCAGCTGGAGCTCTACGTCGTGCGGGCGCAGGACGCG GATCCCGGCGTGCAGAAGCTCGCGCTCGAGAGCATGAGGCAGGAGATTCGCTCTGCCACG AGCTCGATGACTTCGGTTCCAAAGCCACTGAAATTCCTCCGCCCACACTTTGGAACTCTC AAGTCCTATTTCGAAACAATGCAAGAGTCTGAGCTCAAGAAGTACATGGCTGACATTCTG TCAGTGTTAGCTTTGACAATGTCTGTTGAAGGGGAAAGAGAGAGCCTGAAATACCGTTTG TTGGGCTCTGAAGGTGATATTGGTTCATGGGGTCATGAATATGTGAGAAATTTGGCCGGC GAGATTGCACAAGAATTCCAAAAGCGTCAGGATGATGACTTGCCCATTGATGTCCTAATG GAGCTAGTGCAGCAAATTGTTTCATTTCACATGAAGCATAATGCTGAGCCTGAAGCTGTG GATCTTCTTATGGAGGTCGAAGACCTTGATTTACTAGTTGAGCATGTAGATGCTACAAAC TACAAAAGAGCTTGCTTGTACCTGACTAGTTCATCCAAATTTCTCCCTGCCCCTGATGAT ATGTTGGCACTTGACATAGCATATACCATCTACATGAAGTTTGGAGACCTTGCAAGCGCT TTGAGAATTTCTCTGCAGCTTGAGAAATCCACCCAGTATGTGAAGCAAGTCTACACAGCA ACTGATGACCTTCTGTTGAAGAAACAATTCTCATATCTCATTGCACGCCATGGTTTGGCT ATGGAGATTGATGATGAGATCGCCGCTGATGACAATGACAAGGAGGTTTTGCAAGAAATA GTAAATAATACTAAGTTGAGTGAGGGATATCTTACTCTTGCTCGCGATATTGAGGTCATG GAGCCTAAATCCCCAGAGGATATATACAAGGTCCATTTGATTGATGGTCGTGGTGCCAGC TCCAGTCTTGATTCTGCAAGACAGAATTTAGCTGCAACATTTGTAAATGCATTTGTGAAT GCTGGGTTTGGCCAGGACAAGTTGATGACCGCTCCATCTGATTCATCCAGCAGCGGGTCT TCCGGAAATTGGTTATTCAAGAACAAGGAACATGGAAAAGCTAGTGCAGCAGCTAGTCTG GGAATGATTCTCTTGTGGGATACTGATTCCGGGCTCGCTCAGCTTGACAAGTACTTGCAT AGTAATGATACTCATGTTGTTGCTGGAGCTTTGCTAGGTATTGGAATTGTCACTTGTGGG GTGAAGAGTGATTGTGATCCTGCGTTTGCTATTCTTATGGAGTATATTGGCAAGGATGAC TCAAACATTCGTATTGGAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAA GAAGAGCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAGGTC TTGGTCTTCTCGGCCATTGCCATGGGATTGGTGTTTGTCGGTTCTTGCAATGAAGAGATT GCACAGTCTATTATATTTGCTTTGATGGAGCGTAGTGAGGCCGAGTTGGCAGAACCCATT ATACGGTTGCTTCCTGTTGCGCTTGGCCTTTTATATCTTGGAAAACAGGATAGTGTGGAG GCTACCGCAGAGGTCTCTAAAACATTTGATGAGAAGATAGGGAAGTACTGTGATGTAACA CTTATGTCACTGGCATATGCCGGGACAGGAAATGTGCTTAAGGTTCAGAAACTTCTTGGC ATTTGCTCACAGCATCTTGAGAAAGGTGAAACACACCAAGGGCCAGCTGTCCTAGGGATT GCTCTTATTGCTATGGCTGAAGAATTAGGAGCTGAAATGGCTGTACGTTCACTTGAGCGT CTTCTGCAGTATGGCGAGCAGAATATAAGACGGGCAGTTCCTCTTGCTCTTGGTATACTC TGCATATCTAATCCCAAGGTAAACGTTATGGACACACTAAGCAGATTGAGTCATGATGCA GACGCCGATGTGTCGATGGCTGCAATTATCTCATTGGGTTTGATTGGTGCTGGCACAAAC AATGCCAGAATAGCTGGCATGCTTCGCAATCTTTCAAGTTATTACTACAAAGAAGCTGCT CATCTGTTTTGTGTTAGAATTGCCCAGGGCCTTGTCCACCTCGGAAAGGGCTTGTTGACC CTTTCTCCATACCATTCCGATAGATTTCTCCTCTCCCCGATGGCACTTGGGGGCCTTGTA ACCGTTCTCCACGCGTGCCTTGATATGAAGTCCACCATCCTAGGGAAATACCACTACATC CTCTACATTATTGTCCTGGCAATGCAGCCCAGGATGCTTTTGACTGTCGACGAGGATCTG AAGCCCCTGTCAGTACCTGTCCGCGTCGGGCAAGCGGTCGACGTGGTTGGTCAGGCAGGA AGGCCGAAGACAATCACCGGCTTCCAGACACACTCCACGCCGGTCTTGCTCGCAGCAGGG GAGAGAGCTGAACTAGCAACTGAAAAATACATTCCACTGACCCCGGTACTAGAGGGCTTT GTGATTCTGAAGAAGAACCCAGAGTACCACGAGGAGTGA

Peptide Sequence

PEP ID	Zm00001d053881_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:242880809:242889256:-1 gene:Zm00001d053881 transcript:Zm00001d053881_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 2 homolog A
Sequence	MSPPENPSPAAPAEPSQPPPPAAAAKGKGKKDEKKDDDLSEEDLALKEQLELYVVRAQDA DPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHFGTLKSYFETMQESELKKYMADIL SVLALTMSVEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDDLPIDVLM ELVQQIVSFHMKHNAEPEAVDLLMEVEDLDLLVEHVDATNYKRACLYLTSSSKFLPAPDD MLALDIAYTIYMKFGDLASALRISLQLEKSTQYVKQVYTATDDLLLKKQFSYLIARHGLA MEIDDEIAADDNDKEVLQEIVNNTKLSEGYLTLARDIEVMEPKSPEDIYKVHLIDGRGAS SSLDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGSSGNWLFKNKEHGKASAAASL GMILLWDTDSGLAQLDKYLHSNDTHVVAGALLGIGIVTCGVKSDCDPAFAILMEYIGKDD SNIRIGAILGLGIAYAGSQKEELKMHLSAVLGDSQSPLEVLVFSAIAMGLVFVGSCNEEI AQSIIFALMERSEAELAEPIIRLLPVALGLLYLGKQDSVEATAEVSKTFDEKIGKYCDVT LMSLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIAMAEELGAEMAVRSLER LLQYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGLIGAGTN NARIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPMALGGLV TVLHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVDVVGQAG RPKTITGFQTHSTPVLLAAGERAELATEKYIPLTPVLEGFVILKKNPEYHEE

Transcript Sequence

Transcript ID	Zm00001d053881_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:242880809:242889256:-1 gene:Zm00001d053881 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 2 homolog A
Sequence	CTTCTTAATAACAAAGCACAACACAGGCAAAGAGGATCCGTCTTCCTCCGTGCTGCCTCA CTTCCGCCGCACGCGACCGGAGAGGCGGCTCACTGCGTAGCGCCGCGAGCCCAACCCTAG CCCCGCCCGCCCGTCCATTCCTTCCGTCCTTCTGGTGGACCAGCTGCCGAGCCCCTCCGG CAGGCATGTCTCCCCCCGAGAACCCCAGCCCCGCGGCGCCGGCCGAGCCGTCGCAGCCGC CGCCACCGGCGGCCGCGGCCAAGGGGAAGGGGAAGAAGGACGAGAAGAAGGATGACGATC TGTCGGAGGAGGATCTGGCGCTCAAGGAGCAGCTGGAGCTCTACGTCGTGCGGGCGCAGG ACGCGGATCCCGGCGTGCAGAAGCTCGCGCTCGAGAGCATGAGGCAGGAGATTCGCTCTG CCACGAGCTCGATGACTTCGGTTCCAAAGCCACTGAAATTCCTCCGCCCACACTTTGGAA CTCTCAAGTCCTATTTCGAAACAATGCAAGAGTCTGAGCTCAAGAAGTACATGGCTGACA TTCTGTCAGTGTTAGCTTTGACAATGTCTGTTGAAGGGGAAAGAGAGAGCCTGAAATACC GTTTGTTGGGCTCTGAAGGTGATATTGGTTCATGGGGTCATGAATATGTGAGAAATTTGG CCGGCGAGATTGCACAAGAATTCCAAAAGCGTCAGGATGATGACTTGCCCATTGATGTCC TAATGGAGCTAGTGCAGCAAATTGTTTCATTTCACATGAAGCATAATGCTGAGCCTGAAG CTGTGGATCTTCTTATGGAGGTCGAAGACCTTGATTTACTAGTTGAGCATGTAGATGCTA CAAACTACAAAAGAGCTTGCTTGTACCTGACTAGTTCATCCAAATTTCTCCCTGCCCCTG ATGATATGTTGGCACTTGACATAGCATATACCATCTACATGAAGTTTGGAGACCTTGCAA GCGCTTTGAGAATTTCTCTGCAGCTTGAGAAATCCACCCAGTATGTGAAGCAAGTCTACA CAGCAACTGATGACCTTCTGTTGAAGAAACAATTCTCATATCTCATTGCACGCCATGGTT TGGCTATGGAGATTGATGATGAGATCGCCGCTGATGACAATGACAAGGAGGTTTTGCAAG AAATAGTAAATAATACTAAGTTGAGTGAGGGATATCTTACTCTTGCTCGCGATATTGAGG TCATGGAGCCTAAATCCCCAGAGGATATATACAAGGTCCATTTGATTGATGGTCGTGGTG CCAGCTCCAGTCTTGATTCTGCAAGACAGAATTTAGCTGCAACATTTGTAAATGCATTTG TGAATGCTGGGTTTGGCCAGGACAAGTTGATGACCGCTCCATCTGATTCATCCAGCAGCG GGTCTTCCGGAAATTGGTTATTCAAGAACAAGGAACATGGAAAAGCTAGTGCAGCAGCTA GTCTGGGAATGATTCTCTTGTGGGATACTGATTCCGGGCTCGCTCAGCTTGACAAGTACT TGCATAGTAATGATACTCATGTTGTTGCTGGAGCTTTGCTAGGTATTGGAATTGTCACTT GTGGGGTGAAGAGTGATTGTGATCCTGCGTTTGCTATTCTTATGGAGTATATTGGCAAGG ATGACTCAAACATTCGTATTGGAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCC AGAAAGAAGAGCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTG AGGTCTTGGTCTTCTCGGCCATTGCCATGGGATTGGTGTTTGTCGGTTCTTGCAATGAAG AGATTGCACAGTCTATTATATTTGCTTTGATGGAGCGTAGTGAGGCCGAGTTGGCAGAAC CCATTATACGGTTGCTTCCTGTTGCGCTTGGCCTTTTATATCTTGGAAAACAGGATAGTG TGGAGGCTACCGCAGAGGTCTCTAAAACATTTGATGAGAAGATAGGGAAGTACTGTGATG TAACACTTATGTCACTGGCATATGCCGGGACAGGAAATGTGCTTAAGGTTCAGAAACTTC TTGGCATTTGCTCACAGCATCTTGAGAAAGGTGAAACACACCAAGGGCCAGCTGTCCTAG GGATTGCTCTTATTGCTATGGCTGAAGAATTAGGAGCTGAAATGGCTGTACGTTCACTTG AGCGTCTTCTGCAGTATGGCGAGCAGAATATAAGACGGGCAGTTCCTCTTGCTCTTGGTA TACTCTGCATATCTAATCCCAAGGTAAACGTTATGGACACACTAAGCAGATTGAGTCATG ATGCAGACGCCGATGTGTCGATGGCTGCAATTATCTCATTGGGTTTGATTGGTGCTGGCA CAAACAATGCCAGAATAGCTGGCATGCTTCGCAATCTTTCAAGTTATTACTACAAAGAAG CTGCTCATCTGTTTTGTGTTAGAATTGCCCAGGGCCTTGTCCACCTCGGAAAGGGCTTGT TGACCCTTTCTCCATACCATTCCGATAGATTTCTCCTCTCCCCGATGGCACTTGGGGGCC TTGTAACCGTTCTCCACGCGTGCCTTGATATGAAGTCCACCATCCTAGGGAAATACCACT ACATCCTCTACATTATTGTCCTGGCAATGCAGCCCAGGATGCTTTTGACTGTCGACGAGG ATCTGAAGCCCCTGTCAGTACCTGTCCGCGTCGGGCAAGCGGTCGACGTGGTTGGTCAGG CAGGAAGGCCGAAGACAATCACCGGCTTCCAGACACACTCCACGCCGGTCTTGCTCGCAG CAGGGGAGAGAGCTGAACTAGCAACTGAAAAATACATTCCACTGACCCCGGTACTAGAGG GCTTTGTGATTCTGAAGAAGAACCCAGAGTACCACGAGGAGTGAAGACCCAGATAGCATA TTGGTGTTTCCGAGGCCCGTCCAGATAGGCAGCCTCGAATTTGCGCGGCCTTCGGCAGCG CCATCCTGGCCCTCTCCTTCCTGGGTCCGTGTCCATGTTTGATTCTTATCTTACCGGAGC TGTGGCTAACTGAAAGAGCTGTCTTTGGTTGGCTTAACTTGTAGTACGACCGTATTTATT AAT