Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053874_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:242693596:242697891:1 gene:Zm00001d053874 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	ATGGAGAAAGGGGACGTGCTGGTGGACCTGGACAAGCTCCCTATGAAGCGCCTTGAGGCC ATCGACGAGACTGGCAACGAGCACTACCCACCGGACACTAGCAACGAGGAGCAGCGGCTC GCGGCCATCCGCCGGATTGACTTCTCTTGGGTCATAGAGAAGGATGCAAAGAAGGCCAAG AAGGCGGCTGAGGCTGATACTACCCAGCAGGCATGGCCCTGGCAGGGCCTTATGGAGAGC CTGCAGCAGGCACATCAGGAGCTCTCCGTCGTCATAGACCTCATCGGCACGGTTGAGGCT AATGACGCCATGGCAGTCGCCTCGACAACGAAGCCCAAGTCACAGCCAAACGAAATACTA GTTGACATGGCAGTGTGTGCTGCCACCAAGCTCCAGTGCCTTAGGCATTTGTCACGGTAC TTCAAACAATCTGCTACGACAATGGAGCAACAGTTCCAAAAGGAGACTAGGTTCTACAGC TCCTTAATAAGATTACAGCAGAACTGGAAAGTGAAGCGGCAGCGGTCTGTTGGGAGTCCA GGAAGTGAGGGCTTCATGTTTGATCTAGTTGATACTTCTCAGCTAGACACAACAACAATG CCTCGATTATCACCATTATCTTTGATTCCAATTGATCAAGACTCTTCAGGCACTTTGTCT GTACAAATTCCACAGAAGTGTTTCCATTCCTTGAGCCTTCGATTTCATGGAGACATAGCC AATAATGCAGAAAGCAGTGCTGTCAAAAGGAAAGAAGGCACATTAACCAACACTACTACC GGAGCCGAAAATGATGTTTTGGAGAACGATGATGTCAATAAGTCTACTGAACATGCACAT TCCATCTTGCGCGACATCCATAAGTCCATATTTGAGGAGCAGGTTTTTGATATGGTGATC CAGGAGACATTTATCCAATCTCAAGGCATCAATGTTACTGGAATGTGCGAAGATTTTCTC CAATTAGCGATTGGTCAGGAATGTTCTTTGTGCCTTTCGCATGATCTCTCTGGGCAGAAT AATAACTCGGGGACAGTAGGGCAGGAAGATCATATGGATATAGATCATACTGGAAATCTT GCAGTAGCCACTGTAAATGGGAAGGAGTCTTCAAATAAGGATGTGAGAGGGTTTCCTAAC CCCAAAAGCTTAGAAATTTACCTGCTACATGTGTTCCATGAAGGCATCCTTAGAAAACTC AGGGAGAAATCTCGTCATGTGGTTCGGTACCAGAGTTCTGCTCAGGGTACACCTGACGAG TGTGGCCTGCTAAGTCATTTTTGCATGACAGTGTCTCACAGGATATTTTCTAGCAAAGTA CATTTGGAGCTTGAAAGTGTGGTTAGTAGGGTTCCTTATCTCCATCTGTGTTCCCTTCCT ACATGGCATTCTCGAACGTCCTCCTGGTCTCTCTGCCTGAAAGTTCCTCAGCCTATCCTG GCCACTGATCGAGTCAGAAGGCCTTCAGACTACAGTGAGTTGAAGTGCAAATCCAGGTCA CAGTTCGGTACAAAGGTGATCTTGAAAGATGGACAGATTAGTTTAATGGGCGAGGGCTCT CCAAGCATTGCTGGATCGTTAGCTGGGAAGCCATCCGATGGACGCCTGGTAAATAGTTAC AATTGTGACTTGGAAGATCTCCCAATGATGCTTCTGCAGCAGGTTGCCAGCCAAGTAATC CACTGGCTCCACGATGAAGCGGTGGTCCTTGGGATGAACGCGACAATAGATTTCCTGTGC CTGTACTTGGACCTTGACCAAGGTGAAACACTAGGCCTGGTGGCACACGTTGACCCGGAT GACACCTACGGCTGCGTCTCATGGTACCTCACTCTTGATCATCACCCAACGGAGGAAGGG AAGATGTCAGCGGGTAGTCCGGAGCTAGAGGAGCGCAGGTTTTTGGGGTACCTTTCCCCG GAATTGCTTTACTCTACCCTGATGGACCTGGTAAAACTGTGCAGCACAGGTGTCCAACGC TGA

Peptide Sequence

PEP ID	Zm00001d053874_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:242693596:242697891:1 gene:Zm00001d053874 transcript:Zm00001d053874_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	MEKGDVLVDLDKLPMKRLEAIDETGNEHYPPDTSNEEQRLAAIRRIDFSWVIEKDAKKAK KAAEADTTQQAWPWQGLMESLQQAHQELSVVIDLIGTVEANDAMAVASTTKPKSQPNEIL VDMAVCAATKLQCLRHLSRYFKQSATTMEQQFQKETRFYSSLIRLQQNWKVKRQRSVGSP GSEGFMFDLVDTSQLDTTTMPRLSPLSLIPIDQDSSGTLSVQIPQKCFHSLSLRFHGDIA NNAESSAVKRKEGTLTNTTTGAENDVLENDDVNKSTEHAHSILRDIHKSIFEEQVFDMVI QETFIQSQGINVTGMCEDFLQLAIGQECSLCLSHDLSGQNNNSGTVGQEDHMDIDHTGNL AVATVNGKESSNKDVRGFPNPKSLEIYLLHVFHEGILRKLREKSRHVVRYQSSAQGTPDE CGLLSHFCMTVSHRIFSSKVHLELESVVSRVPYLHLCSLPTWHSRTSSWSLCLKVPQPIL ATDRVRRPSDYSELKCKSRSQFGTKVILKDGQISLMGEGSPSIAGSLAGKPSDGRLVNSY NCDLEDLPMMLLQQVASQVIHWLHDEAVVLGMNATIDFLCLYLDLDQGETLGLVAHVDPD DTYGCVSWYLTLDHHPTEEGKMSAGSPELEERRFLGYLSPELLYSTLMDLVKLCSTGVQR

Transcript Sequence

Transcript ID	Zm00001d053874_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:242693596:242697891:1 gene:Zm00001d053874 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	AAGCACCAAGCACAGAGGATAGCCGCGCTCACCTCCTCAGTCCCCACACGCCCTAGGCGC TGGCGCTGCAAGCTCGGGCAGTCGAGCCGAGCGCTCCCTGCTCGGCGGACGCTGGCCGTG GCTCGCCCTCGCTGTGCCGACACGCCGGCAACCATCTCCCCTCCAGGTATCCCTCTCCCG CCTCCTGCCTCCGGTGCTTCTATTCGACAGCTTCCTCCCCGACCGTCGCCCTCCCTTTTC TGCGTGGCCGCGCGCGGCTGGCGGGCAGCAGCAGCAGCCCAGCCGTCGAGCCTAATTGGG GATTTTTGGGTGATTGTGTGTGTGTGTGTTTTATGGTTGTTCGATTTGGGATTTTTAGAT GACTGCCTAACATTACATTATCGCTTACTGAACTTACTGAATCGTGGGGCAACTTGTACC AAATTGCTAAATGATTTTTTTTGCCAAATTGCTTATGAAAATTTTGATGTTCATACCCCT ATGCTAAAATCCTAGATCCGCCACTGATGGTTGGCTCAAACTTATGAAAAGAGCTAGCTA AGGAAACAGGGCCAAAGTGAGCTCCAGGGAAAAAAAAAGAGCACCATGGAGAAAGGGGAC GTGCTGGTGGACCTGGACAAGCTCCCTATGAAGCGCCTTGAGGCCATCGACGAGACTGGC AACGAGCACTACCCACCGGACACTAGCAACGAGGAGCAGCGGCTCGCGGCCATCCGCCGG ATTGACTTCTCTTGGGTCATAGAGAAGGATGCAAAGAAGGCCAAGAAGGCGGCTGAGGCT GATACTACCCAGCAGGCATGGCCCTGGCAGGGCCTTATGGAGAGCCTGCAGCAGGCACAT CAGGAGCTCTCCGTCGTCATAGACCTCATCGGCACGGTTGAGGCTAATGACGCCATGGCA GTCGCCTCGACAACGAAGCCCAAGTCACAGCCAAACGAAATACTAGTTGACATGGCAGTG TGTGCTGCCACCAAGCTCCAGTGCCTTAGGCATTTGTCACGGTACTTCAAACAATCTGCT ACGACAATGGAGCAACAGTTCCAAAAGGAGACTAGGTTCTACAGCTCCTTAATAAGATTA CAGCAGAACTGGAAAGTGAAGCGGCAGCGGTCTGTTGGGAGTCCAGGAAGTGAGGGCTTC ATGTTTGATCTAGTTGATACTTCTCAGCTAGACACAACAACAATGCCTCGATTATCACCA TTATCTTTGATTCCAATTGATCAAGACTCTTCAGGCACTTTGTCTGTACAAATTCCACAG AAGTGTTTCCATTCCTTGAGCCTTCGATTTCATGGAGACATAGCCAATAATGCAGAAAGC AGTGCTGTCAAAAGGAAAGAAGGCACATTAACCAACACTACTACCGGAGCCGAAAATGAT GTTTTGGAGAACGATGATGTCAATAAGTCTACTGAACATGCACATTCCATCTTGCGCGAC ATCCATAAGTCCATATTTGAGGAGCAGGTTTTTGATATGGTGATCCAGGAGACATTTATC CAATCTCAAGGCATCAATGTTACTGGAATGTGCGAAGATTTTCTCCAATTAGCGATTGGT CAGGAATGTTCTTTGTGCCTTTCGCATGATCTCTCTGGGCAGAATAATAACTCGGGGACA GTAGGGCAGGAAGATCATATGGATATAGATCATACTGGAAATCTTGCAGTAGCCACTGTA AATGGGAAGGAGTCTTCAAATAAGGATGTGAGAGGGTTTCCTAACCCCAAAAGCTTAGAA ATTTACCTGCTACATGTGTTCCATGAAGGCATCCTTAGAAAACTCAGGGAGAAATCTCGT CATGTGGTTCGGTACCAGAGTTCTGCTCAGGGTACACCTGACGAGTGTGGCCTGCTAAGT CATTTTTGCATGACAGTGTCTCACAGGATATTTTCTAGCAAAGTACATTTGGAGCTTGAA AGTGTGGTTAGTAGGGTTCCTTATCTCCATCTGTGTTCCCTTCCTACATGGCATTCTCGA ACGTCCTCCTGGTCTCTCTGCCTGAAAGTTCCTCAGCCTATCCTGGCCACTGATCGAGTC AGAAGGCCTTCAGACTACAGTGAGTTGAAGTGCAAATCCAGGTCACAGTTCGGTACAAAG GTGATCTTGAAAGATGGACAGATTAGTTTAATGGGCGAGGGCTCTCCAAGCATTGCTGGA TCGTTAGCTGGGAAGCCATCCGATGGACGCCTGGTAAATAGTTACAATTGTGACTTGGAA GATCTCCCAATGATGCTTCTGCAGCAGGTTGCCAGCCAAGTAATCCACTGGCTCCACGAT GAAGCGGTGGTCCTTGGGATGAACGCGACAATAGATTTCCTGTGCCTGTACTTGGACCTT GACCAAGGTGAAACACTAGGCCTGGTGGCACACGTTGACCCGGATGACACCTACGGCTGC GTCTCATGGTACCTCACTCTTGATCATCACCCAACGGAGGAAGGGAAGATGTCAGCGGGT AGTCCGGAGCTAGAGGAGCGCAGGTTTTTGGGGTACCTTTCCCCGGAATTGCTTTACTCT ACCCTGATGGACCTGGTAAAACTGTGCAGCACAGGTGTCCAACGCTGAGACTCTGCCCAC GGAGTAGTGGGAGTCTCATGCGCGGTAAGTCTCACGGATAGGGGTAGTAATGGGCCTTAA AATTTTGCACTGTGAAATTTAAGAATTAGATCAGATTAGGATATAATCATCAAACTCTAT CTTTATCCATTTTAAACTAAATTAGTTAAGAAGTCAAACACTTTGGATCTGGGATCCGTT ACCAATCATCTCTACTCGCTGCCCTCCTCCAAGTCCAGAGAAACGTGCAAGTGCAGATAG CAGGAAAAAAAAAGAGAGATAAGATGTGCACTCTGGGCCAGGCCTAGTCCGCTGACCTGT CGCCGGCCCACCAAAAAGAGATGGCAATCCTTCCTTCCTTCCTAGCTCCTTTCCCGACTG CCTCTCTACTGTCCGTGTCATGTCAAGTCTTCTGATGATCTCCGTACCCATGTCCGTCTT TTACTATTCCTCGTGAGACGGCTTCCAGTGAAAAAAAACCGACAGCTTTGGCAGCTAGCA ACATTTCGCTTTGCGTTTTGACCGGTGCACTTGCCAGAAGCCAGGAAAAAAGTTTTCTCG TGTGTTCGGTAACGGTTGAAGCCAGCAGATCGATCGTGTTCGCGTTTTAATCGTGGTCAT TATGGTGACAAGACAGGACTAGAGTCAAGGTGAGGTAGGGTGGCCGGGAAGGCTGAAGCT TATCCACACAGCACTGTGTGTGAAGGCATGCAGCTCCATCTTTCACACTCTCTTCCTCAC GGTCACGGCCATGGTCGATCGAACCGACAGCATATATGGCGTACTACACCACAAAGATCC TGATCCTGTCCTTACATCTTGTATGAATGTACTGTACTGCAAGGATCAGTGGAAAAAAAA GAAGAT