Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053861_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:4:242512425:242521763:1 gene:Zm00001d053861 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation elongation factor family protein

Sequence

ATGGCCACCGCCACCGCTTCCCGCCTCGCCGTCCTCGCGCCGCGGCCGTCGCGCCCCGCA
CCGGGGCGCCGGCGACATGCTCCTGCTACCGGTCGTGGTCCTCCCCTCCCTCGCAGTCTC
TACGCAGCGCCCCGCGGCCGCGTTCTCTGCCTCGCGGCCCCCGCGCCCGCTGCTGCCTCC
ACCACCGACGCCGGCCAGGACCGCCTCCAGAAGGTGCCCATTTCGAATATCAGGAACTTC
TGCATCATCGCGCACATTGACCATGGCAAGTCCACACTGGCGGATAAGCTGCTGGAGCTT
ACTGGCACGGTGCAGAAGAGGGAGATGAAGGAGCAGTTTCTGGATAACATGGACCTGGAG
AGGGAGAGAGGGATCACCATAAAATTGCAGGCAGCTCGGATGCGCTACGTCATGAATAAT
GAGCCTTACTGCCTGAATTTAATTGATACACCAGGGCATGTTGATTTCTCGTACGAGGTT
TCCCGCTCTCTAGCTGCCTGTGAGGGCGCACTTCTTGTTGTTGATGCTTCTCAGGGTGTT
GAAGCTCAGACGTTAGCGAATGTGTACCTTGCATTGGAAAACAACCTTGAAATCATACCG
GTTCTAAATAAAATAGATCTTCCTGGTGCTGAACCTGATCGTGTCGCACAGGAAATTGAA
GAGATAATTGGATTGGACTGTCGTGATGCAATTCGGTGTTCAGCAAAGGAAGGTATAGGC
ATCACTGAAATATTAGATGCCCTTGTGACCAAAATCCCCCCACCAAAAGATACATCAAAA
GATCCTCTCAGGGCTCTTATATTTGACAGCTATTATGATCCATACAGAGGTGTAATTGTG
TACTTCCGTGTTATTGATGGCAGTATGAAGAAAGGGGACAAGATATGTTTTATGGCCAAT
GGAAAGGAATATGTTGCTGAAGAAATTGGTGTACTATCCCCAAATCAGATGCAAGTTTCT
GAACTATATGCTGGCGAGGTTGGTTATCTCTCTGCTTCTATAAGATCAGTAGCAGATGCC
AGGGTTGGTGATACTATTACACATTATTCAAAAAAAGCACATCATGCTTTACCAGGATAT
TCTGAAGCCACTCCAATGGTTTTTTGTGGCTTGTTCCCTATAGATGCTGATCAGTTTGAG
GAGTTGCGGGAAGCGCTGGAAAAACTTCAGCTAAATGATGCTGCCCTAAAGTTTGAACCA
GAATCTTCTAGTGCCATGGGGTTTGGCTTCAGATGTGGGTTCCTTGGTCTTCTCCATATG
GAAATAGTTCAGGAAAGGCTTGAGAGGGAATACAACTTGAACTTAATAATTACTGCACCA
AGCGTGGTATACCGTGTGAACTGTGCTGATGGTGAAACTGTTGAATGTTCAAATCCATCC
TTGCTTCCGGAGCCTGGGAAGCGGAGGTCTATAGAAGAACCATATGTGAAGATTGAAATG
CTTACACCAAAAGATTATATTGGTTCAATAATGGAGCTGACTCAAGACAGAAGAGGTGAA
TTCAAGGAAATGAACTTCATCACAGAAAGCAGGGCCAAACTTATTTATGAGCTACCACTA
GCAGAGATGGTTGGCGATTTCTTTGATCAACTGAAATCACGAAGTAAAGGATATGCTAGC
ATGGAATATTCAGTTGTTGGGTACAGAGAAAGCCAACTAGTAAAGCTGGATATACAAATC
AACGGGGATCCTGTTGAGGCGTTGTCAACAATTGTGCACAGGGATAAGGCATATGCTGTT
GGAAGGGCACTTACTCAAAAGCTCAAGGAACTTATACCTCGGCAAATGTTTAGAGTTCCT
ATTCAAGCATGTATTGGCACAAAGGTGATTGCAAGCGAAGCCCTGTCTGCCATCAGGAAG
GATGTCTTATCAAAATGCTATGGGGGTGATATA

Peptide Sequence

PEP ID

Zm00001d053861_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:4:242512425:242521763:1 gene:Zm00001d053861 transcript:Zm00001d053861_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation elongation factor family protein

Sequence

MATATASRLAVLAPRPSRPAPGRRRHAPATGRGPPLPRSLYAAPRGRVLCLAAPAPAAAS
TTDAGQDRLQKVPISNIRNFCIIAHIDHGKSTLADKLLELTGTVQKREMKEQFLDNMDLE
RERGITIKLQAARMRYVMNNEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGV
EAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVAQEIEEIIGLDCRDAIRCSAKEGIG
ITEILDALVTKIPPPKDTSKDPLRALIFDSYYDPYRGVIVYFRVIDGSMKKGDKICFMAN
GKEYVAEEIGVLSPNQMQVSELYAGEVGYLSASIRSVADARVGDTITHYSKKAHHALPGY
SEATPMVFCGLFPIDADQFEELREALEKLQLNDAALKFEPESSSAMGFGFRCGFLGLLHM
EIVQERLEREYNLNLIITAPSVVYRVNCADGETVECSNPSLLPEPGKRRSIEEPYVKIEM
LTPKDYIGSIMELTQDRRGEFKEMNFITESRAKLIYELPLAEMVGDFFDQLKSRSKGYAS
MEYSVVGYRESQLVKLDIQINGDPVEALSTIVHRDKAYAVGRALTQKLKELIPRQMFRVP
IQACIGTKVIASEALSAIRKDVLSKCYGGDI

Transcript Sequence

Transcript ID

Zm00001d053861_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:242512425:242521763:1 gene:Zm00001d053861 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation elongation factor family protein

Sequence

AAGCGAACCTCTGCGGCCCGCAGGCTCCAGCGCTCATCCACCTCTCATGGCCACCGCCAC
CGCTTCCCGCCTCGCCGTCCTCGCGCCGCGGCCGTCGCGCCCCGCACCGGGGCGCCGGCG
ACATGCTCCTGCTACCGGTCGTGGTCCTCCCCTCCCTCGCAGTCTCTACGCAGCGCCCCG
CGGCCGCGTTCTCTGCCTCGCGGCCCCCGCGCCCGCTGCTGCCTCCACCACCGACGCCGG
CCAGGACCGCCTCCAGAAGGTGCCCATTTCGAATATCAGGAACTTCTGCATCATCGCGCA
CATTGACCATGGCAAGTCCACACTGGCGGATAAGCTGCTGGAGCTTACTGGCACGGTGCA
GAAGAGGGAGATGAAGGAGCAGTTTCTGGATAACATGGACCTGGAGAGGGAGAGAGGGAT
CACCATAAAATTGCAGGCAGCTCGGATGCGCTACGTCATGAATAATGAGCCTTACTGCCT
GAATTTAATTGATACACCAGGGCATGTTGATTTCTCGTACGAGGTTTCCCGCTCTCTAGC
TGCCTGTGAGGGCGCACTTCTTGTTGTTGATGCTTCTCAGGGTGTTGAAGCTCAGACGTT
AGCGAATGTGTACCTTGCATTGGAAAACAACCTTGAAATCATACCGGTTCTAAATAAAAT
AGATCTTCCTGGTGCTGAACCTGATCGTGTCGCACAGGAAATTGAAGAGATAATTGGATT
GGACTGTCGTGATGCAATTCGGTGTTCAGCAAAGGAAGGTATAGGCATCACTGAAATATT
AGATGCCCTTGTGACCAAAATCCCCCCACCAAAAGATACATCAAAAGATCCTCTCAGGGC
TCTTATATTTGACAGCTATTATGATCCATACAGAGGTGTAATTGTGTACTTCCGTGTTAT
TGATGGCAGTATGAAGAAAGGGGACAAGATATGTTTTATGGCCAATGGAAAGGAATATGT
TGCTGAAGAAATTGGTGTACTATCCCCAAATCAGATGCAAGTTTCTGAACTATATGCTGG
CGAGGTTGGTTATCTCTCTGCTTCTATAAGATCAGTAGCAGATGCCAGGGTTGGTGATAC
TATTACACATTATTCAAAAAAAGCACATCATGCTTTACCAGGATATTCTGAAGCCACTCC
AATGGTTTTTTGTGGCTTGTTCCCTATAGATGCTGATCAGTTTGAGGAGTTGCGGGAAGC
GCTGGAAAAACTTCAGCTAAATGATGCTGCCCTAAAGTTTGAACCAGAATCTTCTAGTGC
CATGGGGTTTGGCTTCAGATGTGGGTTCCTTGGTCTTCTCCATATGGAAATAGTTCAGGA
AAGGCTTGAGAGGGAATACAACTTGAACTTAATAATTACTGCACCAAGCGTGGTATACCG
TGTGAACTGTGCTGATGGTGAAACTGTTGAATGTTCAAATCCATCCTTGCTTCCGGAGCC
TGGGAAGCGGAGGTCTATAGAAGAACCATATGTGAAGATTGAAATGCTTACACCAAAAGA
TTATATTGGTTCAATAATGGAGCTGACTCAAGACAGAAGAGGTGAATTCAAGGAAATGAA
CTTCATCACAGAAAGCAGGGCCAAACTTATTTATGAGCTACCACTAGCAGAGATGGTTGG
CGATTTCTTTGATCAACTGAAATCACGAAGTAAAGGATATGCTAGCATGGAATATTCAGT
TGTTGGGTACAGAGAAAGCCAACTAGTAAAGCTGGATATACAAATCAACGGGGATCCTGT
TGAGGCGTTGTCAACAATTGTGCACAGGGATAAGGCATATGCTGTTGGAAGGGCACTTAC
TCAAAAGCTCAAGGAACTTATACCTCGGCAAATGTTTAGAGTTCCTATTCAAGCATGTAT
TGGCACAAAGGTGATTGCAAGCGAAGCCCTGTCTGCCATCAGGAAGGATGTCTTATCAAA
ATGCTATGGGGGTGATATATC