Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053852_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:242208559:242212798:-1 gene:Zm00001d053852 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	ATGTTCGACAGTCTGCTCAACTCCAAGTTCTACAACAAATGCAAGCACGCGATCAAGTGC ACCCGGACCCGGCTGGATCTGCTGCGGCGGAAGAAGCAAGCGATGGTCAAGTTCCTCAAG AAGGACGTCGCTGACCTCCTCACCAGCGGCCTTGAATCGCACGCCTTCGCACGGATGGAA GGGCTGATCATTGAGATGAACCAAGCATCGTGCTATGATACGATAGAAGAGTACTGCGAA TATATTGTGAAGCAGCTCAGCCACATGCAGAAAGAGAGTGAATGCCCGCAAGAAGCCTTG GAAGCTGTGTCTACTCTAATATTTGCTGCCGCTAGATTTCCTGATTTGCCTGAACTGTGT GATCTGAGACATATATTCACAGAGAGATATGGGAGTTCTGTCGAGCCTTTTGTTAATTCT GAGTTTGTTCAGAACCTCCAGAATAAATCATTTACTGATGAAGAGAAGTTGCGAGTAATG AAACGTGTTGCTGAAGAATTCTCAGTTCCATTTGATAGCAGGGCACTGCAATGGAAGATA ACTTGTGGCTCTCAAAATAAACATGATCTTCCAAAGAAGAGTTCACTTAAACATGATATG GAACGAGATGGACACAAGGTTGATAGGCATGCTGTTCATGAAAGAAAATCAAAAGCTATG CCTGAAGGCTATGAACAGAAGCAGGAAATGAACGTAAAACCCAAAGATATCCATGTCGTT CCTGATGGCATTGGCCAGTTAGGTGAAAAAAACAGAAAGAACTACTCTGATAAACCTAGT GAGAGAAGGCACGTGGATAATCCTTTGCCTCCTTTGGACATGAAAGAAAAGAATGGTCAG AAAGAAATGAAGAAATCTGGCAAAAAGGATAGTGACCGTCGGAGGGAACTGATGGATGTG GAGGTGTTAGACATCAATGGCTTGAAAAAACAGGATGTTGGTGCGATGAAACCTTCCGGT GGCCCCGATCGTAGTTGGGGTCATGCTGACCTGGGGCTTAAAACTCTGGGCATAGAAAAA CAAGAAATTGATCCAATTTCCACCTTGAATGGTAAAGCAGTGAACAAGCCTCCTCCTTAT TCTAAGCCCTACAGAGCACCAATGGGCGAGAAGGTTGCTGAAGACAGGCAGCCTGTGCCA GAGAAGGCAACCAATATGCGTCCTCCTTATGTTAAGCCAAATTTTGAAAAACATGCAAAT CAAGGCGCAAATGGCCACAAGCAGAGTGGCACCGAAGAAACAATTTACCAGAAGCGTGAA CCAATCTATGATCCTGTCTCCGTGAGAAGTAGGGTTCCAAGACCACCTGCACATGCTGAT GAATATGCTGGAATGGAGGAAAAGATGGCAAACCAAGCACCTGATGGCCGAAGAAGACAC TCAAGCAAGAGGAATGGTGCCCATGACAATCATGACCAGAGAGTTGCCCATGTTGTACCA CCCTTAGAAGGCATGGGGGTCGATGACGATATCAACAACGCGAGGCCTTTTCATCGAGTT CCTAGCGAGCGAAGAAAGCACAAAAGCAGGCAGAACGGATCGACGAGCGGCAGTGACTAC AATTGGGCCAGCGAAGGCCACGAGTCTGATGGCGACGATGTGAACACATCGATCGATTTC GGCAACCTCCTGCCCCGAGCCCCCAGTTCGCACAGGAAACACAGGAGCCGGAGCGCTGAT CCTCGCAAGGCAGGAGGCCGCGGCGACGACGAGGAGAGGATGATGGACAAGCTTCTGATG CACTACAGCAAGAAAGGGCTGGACAGGGAGGAGCGCAAGGAGAGAGCCAACAAGTCCCGG ACCCTGTTCCCACGAGACGACCAGCGCGGCGACGGAGCCGGAGAACTGTCTAGCAAAGGA GGAGGAGCATCTGCACACCGCCCTGAAAGAGCCGCATCCTTGCCTTCAGAATCCGCAAGC CCCAAGGCAAAGGCGAAGGCGAAGCCCCCTGCTCGGTCCATGTCCATGCAGCCAGAGATG TCGAGGGGGAACGTGCATCCGAGCATGCCGGATTTCGACGAACTCGCCGCGCGCATCAGT GCTCTGAGGAACGCGTGA

Peptide Sequence

PEP ID	Zm00001d053852_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:242208559:242212798:-1 gene:Zm00001d053852 transcript:Zm00001d053852_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	MFDSLLNSKFYNKCKHAIKCTRTRLDLLRRKKQAMVKFLKKDVADLLTSGLESHAFARME GLIIEMNQASCYDTIEEYCEYIVKQLSHMQKESECPQEALEAVSTLIFAAARFPDLPELC DLRHIFTERYGSSVEPFVNSEFVQNLQNKSFTDEEKLRVMKRVAEEFSVPFDSRALQWKI TCGSQNKHDLPKKSSLKHDMERDGHKVDRHAVHERKSKAMPEGYEQKQEMNVKPKDIHVV PDGIGQLGEKNRKNYSDKPSERRHVDNPLPPLDMKEKNGQKEMKKSGKKDSDRRRELMDV EVLDINGLKKQDVGAMKPSGGPDRSWGHADLGLKTLGIEKQEIDPISTLNGKAVNKPPPY SKPYRAPMGEKVAEDRQPVPEKATNMRPPYVKPNFEKHANQGANGHKQSGTEETIYQKRE PIYDPVSVRSRVPRPPAHADEYAGMEEKMANQAPDGRRRHSSKRNGAHDNHDQRVAHVVP PLEGMGVDDDINNARPFHRVPSERRKHKSRQNGSTSGSDYNWASEGHESDGDDVNTSIDF GNLLPRAPSSHRKHRSRSADPRKAGGRGDDEERMMDKLLMHYSKKGLDREERKERANKSR TLFPRDDQRGDGAGELSSKGGGASAHRPERAASLPSESASPKAKAKAKPPARSMSMQPEM SRGNVHPSMPDFDELAARISALRNA

Transcript Sequence

Transcript ID	Zm00001d053852_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:242208559:242212798:-1 gene:Zm00001d053852 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	CTCATCAACAGCTCATATTTTCCTTCCTTCTCCACTACCTCCACCCAGCCATCTTCCCCC ACTCCACCAGGCCACCACCACCACCAGTCCACCACCTCTCTCTCTCTCTCTCCTCCCTTT TTCTCCCCTCTTTCTGATGCTTTGACGCCACAGCTCGCAGCAGCTTTGGCCGCCCCGCCT CTGCCTCTGCCGCTCTGCGTGCCTCCCACCACCTCCTCTGCCACTGGCTAAAAGCCGAGG GCGGAGCTGTAGGAGAAGAGCCGAAGAGAAGGGAGCAGAGAGAAGCGCAGGAGAGGGGAC CGCCGACCACCGAGGGAGCCGGGCAAGATGTTCGACAGTCTGCTCAACTCCAAGTTCTAC AACAAATGCAAGCACGCGATCAAGTGCACCCGGACCCGGCTGGATCTGCTGCGGCGGAAG AAGCAAGCGATGGTCAAGTTCCTCAAGAAGGACGTCGCTGACCTCCTCACCAGCGGCCTT GAATCGCACGCCTTCGCACGGATGGAAGGGCTGATCATTGAGATGAACCAAGCATCGTGC TATGATACGATAGAAGAGTACTGCGAATATATTGTGAAGCAGCTCAGCCACATGCAGAAA GAGAGTGAATGCCCGCAAGAAGCCTTGGAAGCTGTGTCTACTCTAATATTTGCTGCCGCT AGATTTCCTGATTTGCCTGAACTGTGTGATCTGAGACATATATTCACAGAGAGATATGGG AGTTCTGTCGAGCCTTTTGTTAATTCTGAGTTTGTTCAGAACCTCCAGAATAAATCATTT ACTGATGAAGAGAAGTTGCGAGTAATGAAACGTGTTGCTGAAGAATTCTCAGTTCCATTT GATAGCAGGGCACTGCAATGGAAGATAACTTGTGGCTCTCAAAATAAACATGATCTTCCA AAGAAGAGTTCACTTAAACATGATATGGAACGAGATGGACACAAGGTTGATAGGCATGCT GTTCATGAAAGAAAATCAAAAGCTATGCCTGAAGGCTATGAACAGAAGCAGGAAATGAAC GTAAAACCCAAAGATATCCATGTCGTTCCTGATGGCATTGGCCAGTTAGGTGAAAAAAAC AGAAAGAACTACTCTGATAAACCTAGTGAGAGAAGGCACGTGGATAATCCTTTGCCTCCT TTGGACATGAAAGAAAAGAATGGTCAGAAAGAAATGAAGAAATCTGGCAAAAAGGATAGT GACCGTCGGAGGGAACTGATGGATGTGGAGGTGTTAGACATCAATGGCTTGAAAAAACAG GATGTTGGTGCGATGAAACCTTCCGGTGGCCCCGATCGTAGTTGGGGTCATGCTGACCTG GGGCTTAAAACTCTGGGCATAGAAAAACAAGAAATTGATCCAATTTCCACCTTGAATGGT AAAGCAGTGAACAAGCCTCCTCCTTATTCTAAGCCCTACAGAGCACCAATGGGCGAGAAG GTTGCTGAAGACAGGCAGCCTGTGCCAGAGAAGGCAACCAATATGCGTCCTCCTTATGTT AAGCCAAATTTTGAAAAACATGCAAATCAAGGCGCAAATGGCCACAAGCAGAGTGGCACC GAAGAAACAATTTACCAGAAGCGTGAACCAATCTATGATCCTGTCTCCGTGAGAAGTAGG GTTCCAAGACCACCTGCACATGCTGATGAATATGCTGGAATGGAGGAAAAGATGGCAAAC CAAGCACCTGATGGCCGAAGAAGACACTCAAGCAAGAGGAATGGTGCCCATGACAATCAT GACCAGAGAGTTGCCCATGTTGTACCACCCTTAGAAGGCATGGGGGTCGATGACGATATC AACAACGCGAGGCCTTTTCATCGAGTTCCTAGCGAGCGAAGAAAGCACAAAAGCAGGCAG AACGGATCGACGAGCGGCAGTGACTACAATTGGGCCAGCGAAGGCCACGAGTCTGATGGC GACGATGTGAACACATCGATCGATTTCGGCAACCTCCTGCCCCGAGCCCCCAGTTCGCAC AGGAAACACAGGAGCCGGAGCGCTGATCCTCGCAAGGCAGGAGGCCGCGGCGACGACGAG GAGAGGATGATGGACAAGCTTCTGATGCACTACAGCAAGAAAGGGCTGGACAGGGAGGAG CGCAAGGAGAGAGCCAACAAGTCCCGGACCCTGTTCCCACGAGACGACCAGCGCGGCGAC GGAGCCGGAGAACTGTCTAGCAAAGGAGGAGGAGCATCTGCACACCGCCCTGAAAGAGCC GCATCCTTGCCTTCAGAATCCGCAAGCCCCAAGGCAAAGGCGAAGGCGAAGCCCCCTGCT CGGTCCATGTCCATGCAGCCAGAGATGTCGAGGGGGAACGTGCATCCGAGCATGCCGGAT TTCGACGAACTCGCCGCGCGCATCAGTGCTCTGAGGAACGCGTGAGCTGTGCCCCAAGAC TGACTGCCCTTCAGCGACGCTTCTGTTGTTTCAGGAACAAACCTCTACCATGGAATCTGA AACCTGGTGGTGCCTGCGAGTCACGGCCTCACGGGGGATAAGAGGACACTCGAGGAGATA CAACTGTGGCCTGTTTTCGCAGCAATTTTTTTTTGTCTTGGTGGTATACTTGTTCTCGTG TTGCTCTGAGTGTGTCTTGGTGGTAGAGTATTGTCATCAGGAAGAGTTGTTAAGATGTGG CAATTCATAGGGATACCATACTACCATACCGATAGCCAGCTACAGCGATCTGGATGTGGT TGTTTGTTGTACTCATAGAACAGATACTGTTGGTGTGTAAGATGTCCATTGATGCTGCTA CGATGATAAAGAAATTCCTTCTT