Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053819_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:4:241710275:241715647:-1 gene:Zm00001d053819 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 16 description:Auxin response factor 6
Sequence	ATGGAGGCTCAGATCCCCAACTATCCTAGTCTACCTCCGCAGCTTATATGCCAACTGCAT AATGTGACTATGCATGCTGATGCTGAGACAGATGAGGTGTATGCACAGATGACACTCCAG CCACTCAGTCCACAAGAGCTCAAGGACCCATTTTTGCCTGCTGAGTTAGGCACTGCCAGC AACCAGCCAACAAATTATTTTTGTAAAACACTAACTGCAAGTGATACGAGTACACATGGT GGGTTCTCTGTTCCACGCCGAGCAGCTGAGAAGGTGTTTCCTCCACTGGATTTCAATCAG CAACCTCCCGCACAGGAGTTGATTGCAAAAGATCTTCATGGCAACGACTGGAAATTTCGC CATATTTTTCGAGGTCAGCCAAAGCGGCATCTTCTGACAACAGGTTGGAGTGTCTTTGTT AGTGCAAAGAGACTGGTTGCTGGCGACTCTGTCCTTTTTATCTGGAATGACAACAACCAG CTGCTTCTGGGAATTCGCCGGGCAAACAGACCACAAACCGTCATGCCATCATCAGTACTT TCTAGTGATAGCATGCATATTGGCCTGCTCGCTGCTGCAGCTCATGCTGCATCAACAAAT AGCCGGTTTACTATCTTCTATAATCCAAGAGCAAGCCCTTGTGAATTTGTCATACCCATG GCTAAGTATGTGAAAGCTGTGTACCATACCCGTATATCTGTGGGCATGCGTTTCCGGATG CTTTTTGAGACGGAGGAATCTAGTGTAAGGCGTTATATGGGGACAATTACAGGAATAAGT GATCTTGATCCTGTTCGCTGGCCAAACTCGCACTGGCGCTCAGTAAAGGTTGGATGGGAC GAGTCAACTGCTGGAGAGAAGCAGCCAAGGGTATCTCTTTGGGAGATTGAACCGTTGACA ACTTTTCCAATGTATCCATCTCCTTTTGCTCTTGGATTAAAGCGCCCATGGCCTGCAGGC CTGCCTTCTTTATACGGTGGAAGGGGTGATGGCTTGACCTCTTCTCTTATGTGGCTTCGA GACAGGGCAAACCCGGGTTTCCAGTCACTGAATTTCAGCGGGCTTGGTATGAGTCCCTGG ATGCAGCCTAGGCTGGATAATTCCTTACTTGGTCTCCAATCTGACATGTACCAGACCATA GCAGCAGCAGCAGCATTACAAAGCACTACGAAGCAAGTTCCACCTTCAGCAATGCAGTTC CAACAGCCTCAGAACATTGCTGATAGATCTGCTCTTCTATCAAGTCAGATTCTGCAGCAA GTACAACCTCGGTTTCAGCAAATTTACCCTCAAAATCTCAACGAAAACAAAATTCAAGGT CATACACAACCTGAGTACCTCCAAGTCCAACAGCAGCTTCAACGCTGCCAATCATTTAAT GAGCAGAAGCCTCCGATGCATCCACAGCAACAACAGCAGGAACCACAGCAGCAGCAATGC GTCCAAACACCACAGGATCAACAAATGCAAGAACAGAAGCATCTGCACAACTTCCACTCC TTGCCAGATGCATTATCGGCCTTTTCTCAGCTTTCCCCAGCCACTCACTCCCCACCTTCC GCATTGCAGACAGTTCCAGCATTCTCGCATCAACAAAACTTCCCAGATACAAACATTAGC TCTCTCTCACCATCTACTGGCCCTTCAATGCATGGCATGTTGGGGAGATTACCTTCCGAA GCAGCTTCGAGCCTCCCATGTGTGGCAATGAACGCCCCTGTATCGGTATCTGACCCATGG TCATCCAAGAGAGTTGCAGTGGAGTCTGTTAACCCTTGTCGACCTCATGTTTCACCACAT ATAGAACATTTGGATATGGCGACGTGTAACATGCCGCAGAGCTCTGCACTAGCACCATTA CCTGGACGGGAATGCCTAGTGGATGAAGATGGGTGCTCTGATCCTCAAAATCACCTCTTG TTTGGTGTTCACATAGACTCGCATTCACTTCTGATGCAAGGGGGCATTCCAGCCCTTCAG AATGATAACAGTTCAGGCACTATTCCATACTCAACCTCCAATTTCCTGAGCCCTTCTGAG AACGATTTCCCCTTGAATCAACCGCTACGCAGCGCGGGCTGCTTAGATGAGTCGGATTAT CTTCCATGTGCAGAGAATGCCGAACAGGCAAATCAACAGTTTGCAACCTTTGTGAAGGTT TACAAATCCGGGACCGTCGGAAGGTTGCTCGACATCACTAGATTCAGCAGCTACGACGAG CTCCGTAGCGAGGTGGGGCGTCTGTTTGGCCTCGAGGGCCAGCTGGAAGACCCTCTGAGA TCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGGACGATGTCCTTCTGGTTGGCGATGAC CCATGGCAGGAATTCGTGAACAGTGTGTCCTGTATAAAGATACTTTCACCGGAGGAGGTC CAGCGGATGGGAAAGCCGGGCATCCAGCTCCTGAGCTCGGCTCCTTCAAGAAGGCTGGGC AATGGCTGCGACAGCTACGCGAGCATGCAGGAGCCGAGAGGCCTGGACGCTGGGATGGCG CCGGTGGGTTCGGTCGAGTTCTGA

Peptide Sequence

PEP ID	Zm00001d053819_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:4:241710275:241715647:-1 gene:Zm00001d053819 transcript:Zm00001d053819_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 16 description:Auxin response factor 6
Sequence	MEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTAS NQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFR HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVL SSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRM LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT TFPMYPSPFALGLKRPWPAGLPSLYGGRGDGLTSSLMWLRDRANPGFQSLNFSGLGMSPW MQPRLDNSLLGLQSDMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQ VQPRFQQIYPQNLNENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQC VQTPQDQQMQEQKHLHNFHSLPDALSAFSQLSPATHSPPSALQTVPAFSHQQNFPDTNIS SLSPSTGPSMHGMLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPH IEHLDMATCNMPQSSALAPLPGRECLVDEDGCSDPQNHLLFGVHIDSHSLLMQGGIPALQ NDNSSGTIPYSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQFATFVKV YKSGTVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDD PWQEFVNSVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMA PVGSVEF

Transcript Sequence

Transcript ID	Zm00001d053819_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:241710275:241715647:-1 gene:Zm00001d053819 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 16 description:Auxin response factor 6
Sequence	CCGTCAAGCTCTAAGGCTTCCGAAGAATTGAAACCGGGGTTCTTGGGCTTTGCGCCTCGC GCCTCGCGCCGTGATGTAAACTTGATCCCTCGGATCGAAAAGGCCGTCCCTTTGCGCCGG CCGGCCGGCCGGAGGTTTGGCGCTGTTCGGCGGAGGAGCAAGTGGCGGTGCTCAATCCGG ACCACGCCGCGCACGTGCTTGGAAAAGGAGCGTGGTTTGGTGTACAAGGAAGGGCAGCAA GGGCCCTTGCCTCCCCCCTTCCCTCTCCTCTCCATTCCGGTGCGCGCCTGGAACGCGTCT TGTGGGTCGGCCGGCGAGCGGAGCGGCGGGAGGAGAATGAAGCTCTCGCCGTCGGCCAGC GGTGGCCTCCAGGACCAGCCGGCGTCGCCGGAAGAAGCTGAAGAGCACAAGTGCCTGAAT TCTGAGTTGTGGCATGCATGTGCTGGCCCTCTAGTTTCATTGCCTTCGGTCGGTAGTCGA GTGGTGTATTTTCCTCAAGGCCACGGTAGCAGCATCAACAAATAAGGAAATGGAGGCTCA GATCCCCAACTATCCTAGTCTACCTCCGCAGCTTATATGCCAACTGCATAATGTGACTAT GCATGCTGATGCTGAGACAGATGAGGTGTATGCACAGATGACACTCCAGCCACTCAGTCC ACAAGAGCTCAAGGACCCATTTTTGCCTGCTGAGTTAGGCACTGCCAGCAACCAGCCAAC AAATTATTTTTGTAAAACACTAACTGCAAGTGATACGAGTACACATGGTGGGTTCTCTGT TCCACGCCGAGCAGCTGAGAAGGTGTTTCCTCCACTGGATTTCAATCAGCAACCTCCCGC ACAGGAGTTGATTGCAAAAGATCTTCATGGCAACGACTGGAAATTTCGCCATATTTTTCG AGGTCAGCCAAAGCGGCATCTTCTGACAACAGGTTGGAGTGTCTTTGTTAGTGCAAAGAG ACTGGTTGCTGGCGACTCTGTCCTTTTTATCTGGAATGACAACAACCAGCTGCTTCTGGG AATTCGCCGGGCAAACAGACCACAAACCGTCATGCCATCATCAGTACTTTCTAGTGATAG CATGCATATTGGCCTGCTCGCTGCTGCAGCTCATGCTGCATCAACAAATAGCCGGTTTAC TATCTTCTATAATCCAAGAGCAAGCCCTTGTGAATTTGTCATACCCATGGCTAAGTATGT GAAAGCTGTGTACCATACCCGTATATCTGTGGGCATGCGTTTCCGGATGCTTTTTGAGAC GGAGGAATCTAGTGTAAGGCGTTATATGGGGACAATTACAGGAATAAGTGATCTTGATCC TGTTCGCTGGCCAAACTCGCACTGGCGCTCAGTAAAGGTTGGATGGGACGAGTCAACTGC TGGAGAGAAGCAGCCAAGGGTATCTCTTTGGGAGATTGAACCGTTGACAACTTTTCCAAT GTATCCATCTCCTTTTGCTCTTGGATTAAAGCGCCCATGGCCTGCAGGCCTGCCTTCTTT ATACGGTGGAAGGGGTGATGGCTTGACCTCTTCTCTTATGTGGCTTCGAGACAGGGCAAA CCCGGGTTTCCAGTCACTGAATTTCAGCGGGCTTGGTATGAGTCCCTGGATGCAGCCTAG GCTGGATAATTCCTTACTTGGTCTCCAATCTGACATGTACCAGACCATAGCAGCAGCAGC AGCATTACAAAGCACTACGAAGCAAGTTCCACCTTCAGCAATGCAGTTCCAACAGCCTCA GAACATTGCTGATAGATCTGCTCTTCTATCAAGTCAGATTCTGCAGCAAGTACAACCTCG GTTTCAGCAAATTTACCCTCAAAATCTCAACGAAAACAAAATTCAAGGTCATACACAACC TGAGTACCTCCAAGTCCAACAGCAGCTTCAACGCTGCCAATCATTTAATGAGCAGAAGCC TCCGATGCATCCACAGCAACAACAGCAGGAACCACAGCAGCAGCAATGCGTCCAAACACC ACAGGATCAACAAATGCAAGAACAGAAGCATCTGCACAACTTCCACTCCTTGCCAGATGC ATTATCGGCCTTTTCTCAGCTTTCCCCAGCCACTCACTCCCCACCTTCCGCATTGCAGAC AGTTCCAGCATTCTCGCATCAACAAAACTTCCCAGATACAAACATTAGCTCTCTCTCACC ATCTACTGGCCCTTCAATGCATGGCATGTTGGGGAGATTACCTTCCGAAGCAGCTTCGAG CCTCCCATGTGTGGCAATGAACGCCCCTGTATCGGTATCTGACCCATGGTCATCCAAGAG AGTTGCAGTGGAGTCTGTTAACCCTTGTCGACCTCATGTTTCACCACATATAGAACATTT GGATATGGCGACGTGTAACATGCCGCAGAGCTCTGCACTAGCACCATTACCTGGACGGGA ATGCCTAGTGGATGAAGATGGGTGCTCTGATCCTCAAAATCACCTCTTGTTTGGTGTTCA CATAGACTCGCATTCACTTCTGATGCAAGGGGGCATTCCAGCCCTTCAGAATGATAACAG TTCAGGCACTATTCCATACTCAACCTCCAATTTCCTGAGCCCTTCTGAGAACGATTTCCC CTTGAATCAACCGCTACGCAGCGCGGGCTGCTTAGATGAGTCGGATTATCTTCCATGTGC AGAGAATGCCGAACAGGCAAATCAACAGTTTGCAACCTTTGTGAAGGTTTACAAATCCGG GACCGTCGGAAGGTTGCTCGACATCACTAGATTCAGCAGCTACGACGAGCTCCGTAGCGA GGTGGGGCGTCTGTTTGGCCTCGAGGGCCAGCTGGAAGACCCTCTGAGATCAGGCTGGCA GCTTGTATTTGTTGACAGGGAGGACGATGTCCTTCTGGTTGGCGATGACCCATGGCAGGA ATTCGTGAACAGTGTGTCCTGTATAAAGATACTTTCACCGGAGGAGGTCCAGCGGATGGG AAAGCCGGGCATCCAGCTCCTGAGCTCGGCTCCTTCAAGAAGGCTGGGCAATGGCTGCGA CAGCTACGCGAGCATGCAGGAGCCGAGAGGCCTGGACGCTGGGATGGCGCCGGTGGGTTC GGTCGAGTTCTGAAGACGGCGGAGGGAAGCCCACCATGGCCCTCGGGTCGAGGATTACTC TCCCTCCTGTATGTTTCTGCAGCACTTGCTAGCTCTGCGACTTGGAACAAAGCACGTAGA TCAAATGGAGCTCTGTGCTGCTCCCCGTCTGATGATGTCTTATGGTATAGACTCGTAGCA GTAACTACTACATGTTGTATACATGCCGGCACTTCAGTT