Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053802_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:241403906:241405327:-1 gene:Zm00001d053802 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defective kernel10 description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGCCATGGTCTCGCCCTCCCATCCCAGCGTGGGCGGCTGCCAACTCCCTCTTC CGCCGCCACCGCCGCCTGCAGCCCCTCCTCTTCCCGGCCGTCTCTCACTGCGACCACCTC CGCGTTCTGTCCCACTGCCTCGTGTCCGGCCTCGCCCGCAACCCCTTCGTTGCCTCCCGC CTTCTCCTCGCATCCTCCAGCCTCTCCCTCCCCTTCTCCCTCACCCTCCTCGCCTATCTC CCGGCCTCCTCGCTCTCATCGTTCTCCTTCAACTCGCTCATCCGCGCCTCCCCACCGCGC CTCGCGCTCCGCCTGTTTGACGAAATGCGCAGCCGAGGAGTCCCCACGGACCCCTACACC TTACCGCTCCTGATCAGCGCCTGTTCCTGCAGCGGTTTTACACTGTGCCAGTCTCTGCAC GGGCAGGGCTTCCGTCTTGGCTACAATTGCCACGTATTCACCCAGACGGCGCTGTTGAAC GCGTACCTCAAGTGCGGGTCGGTGGCCACCGCTTGCAGGGTGTTCGAGGAAATGCCGGTG AAGGATGTGGTTGCGTGGACCAGCATGGTGTCTGGTTATGTAGACTCCAGGATGTACTTA AAAGCCGTCGAGGTATTTAACGAGATGAGAGGTGCTGATGATCTTGTGTGGCCTAATGAG GCCACAGTGGTGTCACTTGCCACTGCCTGTGCTGGTCTGGGCTCGCTGGAGCATGCAAAG GGTCTGCATTCGTATGTGGAGAAGGCTGGGTTGGAGGACGAGTTAATTGTCAGGAATGCA TTGGTTGACATGTATGGGAAGTGTGGCTGCATTGAGTCGGCACATAGATTGTTTTGTTTG ATGCGTGAGAAGGACTTGCATTCATGGACAACAATGATTTCAGGGCTGTCTTCTCATGGA CGCGGCGAAGAAGCGGTTGGTTTGTTCTTCAGCATGTGCGAGGAGGGAGTATTACCAGAT TCGACCACTTTTATTGTGGTTCTGTCTGCCTGTAGCCATGCTGGACTAGTAGATGAGGGG ATACATATCTTCAATTCCATGGAGAGTGAGCACAATGTCCCCCGGGACACCAAGCACTAT GGTTGCATGGTGGATCTTTTCAGCAGAGCAGGGCTTGTTCGCCGTGCTTATGAATTCATT AGCATGATGCCTTTCGAACCAAACTTGGAGATTCTTGGGGCCCTGCTGAGTGCATGCAGT ATCAATAATGAACTGGAGATTGGGGAGCTCGTGCTCAATAAGATTGACATGGTCTGCTCC TACAAAGGAGGTGCTGGTGTGCTTCTGTCAAATATATATGCTAACCAAAATCTGTGGCAT GAAGTGGATACCATTAGAAGGAAGATAAGGACTGAAGCAATTGTCAGGAAGCCACCTGGT CATAGTTTGATTGCAGCAGAAGTTTCTTCCATGACTTTCTGA

Peptide Sequence

PEP ID	Zm00001d053802_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:241403906:241405327:-1 gene:Zm00001d053802 transcript:Zm00001d053802_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defective kernel10 description:Pentatricopeptide repeat-containing protein
Sequence	MPPPWSRPPIPAWAAANSLFRRHRRLQPLLFPAVSHCDHLRVLSHCLVSGLARNPFVASR LLLASSSLSLPFSLTLLAYLPASSLSSFSFNSLIRASPPRLALRLFDEMRSRGVPTDPYT LPLLISACSCSGFTLCQSLHGQGFRLGYNCHVFTQTALLNAYLKCGSVATACRVFEEMPV KDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADDLVWPNEATVVSLATACAGLGSLEHAK GLHSYVEKAGLEDELIVRNALVDMYGKCGCIESAHRLFCLMREKDLHSWTTMISGLSSHG RGEEAVGLFFSMCEEGVLPDSTTFIVVLSACSHAGLVDEGIHIFNSMESEHNVPRDTKHY GCMVDLFSRAGLVRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCS YKGGAGVLLSNIYANQNLWHEVDTIRRKIRTEAIVRKPPGHSLIAAEVSSMTF

Transcript Sequence

Transcript ID	Zm00001d053802_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:241403906:241405327:-1 gene:Zm00001d053802 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defective kernel10 description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGCCATGGTCTCGCCCTCCCATCCCAGCGTGGGCGGCTGCCAACTCCCTCTTC CGCCGCCACCGCCGCCTGCAGCCCCTCCTCTTCCCGGCCGTCTCTCACTGCGACCACCTC CGCGTTCTGTCCCACTGCCTCGTGTCCGGCCTCGCCCGCAACCCCTTCGTTGCCTCCCGC CTTCTCCTCGCATCCTCCAGCCTCTCCCTCCCCTTCTCCCTCACCCTCCTCGCCTATCTC CCGGCCTCCTCGCTCTCATCGTTCTCCTTCAACTCGCTCATCCGCGCCTCCCCACCGCGC CTCGCGCTCCGCCTGTTTGACGAAATGCGCAGCCGAGGAGTCCCCACGGACCCCTACACC TTACCGCTCCTGATCAGCGCCTGTTCCTGCAGCGGTTTTACACTGTGCCAGTCTCTGCAC GGGCAGGGCTTCCGTCTTGGCTACAATTGCCACGTATTCACCCAGACGGCGCTGTTGAAC GCGTACCTCAAGTGCGGGTCGGTGGCCACCGCTTGCAGGGTGTTCGAGGAAATGCCGGTG AAGGATGTGGTTGCGTGGACCAGCATGGTGTCTGGTTATGTAGACTCCAGGATGTACTTA AAAGCCGTCGAGGTATTTAACGAGATGAGAGGTGCTGATGATCTTGTGTGGCCTAATGAG GCCACAGTGGTGTCACTTGCCACTGCCTGTGCTGGTCTGGGCTCGCTGGAGCATGCAAAG GGTCTGCATTCGTATGTGGAGAAGGCTGGGTTGGAGGACGAGTTAATTGTCAGGAATGCA TTGGTTGACATGTATGGGAAGTGTGGCTGCATTGAGTCGGCACATAGATTGTTTTGTTTG ATGCGTGAGAAGGACTTGCATTCATGGACAACAATGATTTCAGGGCTGTCTTCTCATGGA CGCGGCGAAGAAGCGGTTGGTTTGTTCTTCAGCATGTGCGAGGAGGGAGTATTACCAGAT TCGACCACTTTTATTGTGGTTCTGTCTGCCTGTAGCCATGCTGGACTAGTAGATGAGGGG ATACATATCTTCAATTCCATGGAGAGTGAGCACAATGTCCCCCGGGACACCAAGCACTAT GGTTGCATGGTGGATCTTTTCAGCAGAGCAGGGCTTGTTCGCCGTGCTTATGAATTCATT AGCATGATGCCTTTCGAACCAAACTTGGAGATTCTTGGGGCCCTGCTGAGTGCATGCAGT ATCAATAATGAACTGGAGATTGGGGAGCTCGTGCTCAATAAGATTGACATGGTCTGCTCC TACAAAGGAGGTGCTGGTGTGCTTCTGTCAAATATATATGCTAACCAAAATCTGTGGCAT GAAGTGGATACCATTAGAAGGAAGATAAGGACTGAAGCAATTGTCAGGAAGCCACCTGGT CATAGTTTGATTGCAGCAGAAGTTTCTTCCATGACTTTCTGA